Collecting examples for package 'base'
Running examples in package 'base'

Collecting examples for package 'tools'
Running examples in package 'tools'

Collecting examples for package 'utils'
Running examples in package 'utils'

Collecting examples for package 'grDevices'
Running examples in package 'grDevices'

Collecting examples for package 'graphics'
Running examples in package 'graphics'

Collecting examples for package 'stats'
Running examples in package 'stats'

Collecting examples for package 'datasets'
Running examples in package 'datasets'

Collecting examples for package 'methods'
Running examples in package 'methods'

Collecting examples for package 'grid'
Running examples in package 'grid'

Collecting examples for package 'splines'
Running examples in package 'splines'

Collecting examples for package 'stats4'
Running examples in package 'stats4'

Collecting examples for package 'tcltk'
Running examples in package 'tcltk'
running strict specific tests
running code in '../../../R-2.9-branch/tests/eval-etc.R' ... OK
comparing 'eval-etc.Rout' to '../../../R-2.9-branch/tests/eval-etc.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/simple-true.R' ... OK
comparing 'simple-true.Rout' to '../../../R-2.9-branch/tests/simple-true.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/arith-true.R' ... OK
comparing 'arith-true.Rout' to '../../../R-2.9-branch/tests/arith-true.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/arith.R' ... OK
comparing 'arith.Rout' to '../../../R-2.9-branch/tests/arith.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/lm-tests.R' ... OK
comparing 'lm-tests.Rout' to '../../../R-2.9-branch/tests/lm-tests.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/ok-errors.R' ... OK
comparing 'ok-errors.Rout' to '../../../R-2.9-branch/tests/ok-errors.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/method-dispatch.R' ... OK
comparing 'method-dispatch.Rout' to '../../../R-2.9-branch/tests/method-dispatch.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/d-p-q-r-tests.R' ... OK
comparing 'd-p-q-r-tests.Rout' to '../../../R-2.9-branch/tests/d-p-q-r-tests.Rout.save' ... OK
running sloppy specific tests
running code in '../../../R-2.9-branch/tests/complex.R' ... OK
comparing 'complex.Rout' to '../../../R-2.9-branch/tests/complex.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/print-tests.R' ... OK
comparing 'print-tests.Rout' to '../../../R-2.9-branch/tests/print-tests.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/lapack.R' ... OK
comparing 'lapack.Rout' to '../../../R-2.9-branch/tests/lapack.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/datasets.R' ... OK
comparing 'datasets.Rout' to '../../../R-2.9-branch/tests/datasets.Rout.save' ... OK
running regression tests ...
running code in '../../../R-2.9-branch/tests/reg-tests-1.R' ... OK
running code in '../../../R-2.9-branch/tests/reg-tests-2.R' ... OK
comparing 'reg-tests-2.Rout' to '../../../R-2.9-branch/tests/reg-tests-2.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/reg-IO.R' ... OK
comparing 'reg-IO.Rout' to '../../../R-2.9-branch/tests/reg-IO.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/reg-IO2.R' ... OK
comparing 'reg-IO2.Rout' to '../../../R-2.9-branch/tests/reg-IO2.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/reg-plot.R' ... OK
comparing 'reg-plot.ps' to '../../../R-2.9-branch/tests/reg-plot.ps.save' ... OK
running code in '../../../R-2.9-branch/tests/reg-S4.R' ... OK
comparing 'reg-S4.Rout' to '../../../R-2.9-branch/tests/reg-S4.Rout.save' ... OK
running code in '../../../R-2.9-branch/tests/reg-tests-3.R' ... OK
comparing 'reg-tests-3.Rout' to '../../../R-2.9-branch/tests/reg-tests-3.Rout.save' ... OK
running tests of plotting Latin-1
  expect failure or some differences if not in a Latin or UTF-8 locale
running code in '../../../R-2.9-branch/tests/reg-plot-latin1.R' ... OK
comparing 'reg-plot-latin1.ps' to '../../../R-2.9-branch/tests/reg-plot-latin1.ps.save' ...283,284c283,284
< 374.98 49.96 (R is GNU ., b) 0 ta
< -0.240 (ut not . ...) tb gr
---
> 369.48 49.96 (R is GNU ©, b) 0 ta
> -0.240 (ut not ® ...) tb gr
290,291c290
< 341.11 493.48 (.Latin-1 accented chars) 0 ta
< -0.180 (.: .. .. .<. .<.) tb gr
---
> 435.34 493.48 («Latin-1 accented chars»: éè øØ å<Å æ<Æ) .5 0 t
380,381c379,380
< 263.28 481.43 (Le fr) 0 ta
< -0.120 (an.ais) tb
---
> 253.94 481.43 (Le fr) 0 ta
> -0.120 (ançais) tb
383c382
< -0.360 (a.ile: R.gles) tb
---
> -0.360 (açile: Règles) tb
385c384,386
< 0.480 (t., Egalit., Fr) tb
---
> 0.480 (té) tb
> -0.180 (, Egalité) tb
> -0.180 (, Fr) tb
387,389c388,391
< 0.300 (nit....) tb gr
< 263.95 466.04 (Jetz no chli z.r) 0 ta
< 0.180 (it..tsch: \(noch ein bi.chen Z.rcher deutsch\)) tb gr
---
> 0.300 (nité) tb
> -0.180 (...) tb gr
> 255.28 466.04 (Jetz no chli zür) 0 ta
> 0.180 (itüütsch: \(noch ein bißchen Zürcher deutsch\)) tb gr
 OK
running tests of Internet and socket functions
  expect some differences
running code in '../../../R-2.9-branch/tests/internet.R' ... OK
comparing 'internet.Rout' to '../../../R-2.9-branch/tests/internet.Rout.save' ...17c17
< [1] 1952
---
> [1] 1907
51a52,54
> Error in url("http://foo.bar", "r") : cannot open the connection
> In addition: Warning message:
> In url("http://foo.bar", "r") : unable to resolve 'foo.bar'
 OK

[[system return code 0x0]]

checking build system type... i386-apple-darwin8.11.1
checking host system type... i386-apple-darwin8.11.1
loading site script '../../R-2.9-branch/config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... no
checking for working aclocal... found
checking for working autoconf... found
checking for working automake... found
checking for working autoheader... found
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking whether ln -s works... yes
checking for bison... bison -y
checking for ar... ar
checking for a BSD-compatible install... /usr/bin/install -c
checking for sed... /usr/bin/sed
checking for less... /usr/bin/less
checking for perl... /usr/bin/perl
checking whether perl version is at least 5.8.0... yes
checking for dvips... /usr/texbin/dvips
checking for tex... /usr/texbin/tex
checking for latex... /usr/texbin/latex
checking for makeindex... /usr/texbin/makeindex
checking for pdftex... /usr/texbin/pdftex
checking for pdflatex... /usr/texbin/pdflatex
checking for makeinfo... /usr/bin/makeinfo
checking whether makeinfo version is at least 4.7... yes
checking for texi2dvi... /usr/bin/texi2dvi
checking for unzip... /usr/bin/unzip
checking for zip... /usr/bin/zip
checking for gzip... /usr/bin/gzip
checking for firefox... no
checking for mozilla... no
checking for galeon... no
checking for opera... no
checking for xdg-open... no
checking for kfmclient... no
checking for gnome-moz-remote... no
checking for open... /usr/bin/open
using default browser ... /usr/bin/open
checking for acroread... no
checking for acroread4... no
checking for evince... no
checking for xpdf... no
checking for gv... no
checking for gnome-gv... no
checking for ggv... no
checking for kghostview... no
checking for open... /usr/bin/open
checking for pkg-config... /usr/local/bin/pkg-config
checking for gcc... gcc -arch i386 -std=gnu99
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc -arch i386 -std=gnu99 accepts -g... yes
checking for gcc -arch i386 -std=gnu99 option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -arch i386 -std=gnu99 -E
checking whether gcc -arch i386 -std=gnu99 needs -traditional... 
rm: conftest.dSYM: is a directory
rm: conftest.dSYM: is a directory
no
checking how to run the C preprocessor... gcc -arch i386 -std=gnu99 -E
defining F77 to be gfortran -arch i386
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran -arch i386 accepts -g... yes
checking whether we are using the GNU C++ compiler... yes
checking whether g++ -arch i386 accepts -g... yes
checking how to run the C++ preprocessor... g++ -arch i386 -E
checking whether __attribute__((visibility())) is supported... no
checking whether gcc -arch i386 -std=gnu99 accepts -fvisibility... yes
checking whether gfortran -arch i386 accepts -fvisibility... yes
checking whether we are using the GNU Objective C compiler... yes
checking whether gcc -arch i386 -std=gnu99 accepts -g... yes
checking for Objective C++ compiler... trying some possibilities
checking whether g++ -arch i386 can compile ObjC++... yes
g++ -arch i386
checking for a sed that does not truncate output... (cached) /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc -arch i386 -std=gnu99... /usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld
checking if the linker (/usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -p
checking the name lister (/usr/bin/nm -p) interface... BSD nm
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... no
checking for /usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -p output from gcc -arch i386 -std=gnu99 object... ok
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... otool64
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for ANSI C header files... 
rm: conftest.dSYM: is a directory
rm: conftest.dSYM: is a directory
yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether g++ -arch i386 accepts -g... (cached) yes
checking how to run the C++ preprocessor... g++ -arch i386 -E
checking whether we are using the GNU Fortran 77 compiler... (cached) yes
checking whether gfortran -arch i386 accepts -g... (cached) yes
checking for objdir... .libs

rm: conftest.dSYM: is a directory
checking if gcc -arch i386 -std=gnu99 supports -fno-rtti -fno-exceptions... no
checking for gcc -arch i386 -std=gnu99 option to produce PIC... -fno-common -DPIC
checking if gcc -arch i386 -std=gnu99 PIC flag -fno-common -DPIC works... yes
checking if gcc -arch i386 -std=gnu99 static flag -static works... no
checking if gcc -arch i386 -std=gnu99 supports -c -o file.o... yes
checking if gcc -arch i386 -std=gnu99 supports -c -o file.o... (cached) yes
checking whether the gcc -arch i386 -std=gnu99 linker (/usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin8.11.1 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for ld used by g++ -arch i386... /usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld
checking if the linker (/usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld) is GNU ld... no
checking whether the g++ -arch i386 linker (/usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld) supports shared libraries... yes
checking for g++ -arch i386 option to produce PIC... -fno-common -DPIC
checking if g++ -arch i386 PIC flag -fno-common -DPIC works... yes
checking if g++ -arch i386 static flag -static works... no
checking if g++ -arch i386 supports -c -o file.o... yes
checking if g++ -arch i386 supports -c -o file.o... (cached) yes
checking whether the g++ -arch i386 linker (/usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin8.11.1 dyld
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gfortran -arch i386 option to produce PIC... -fno-common
checking if gfortran -arch i386 PIC flag -fno-common works... yes
checking if gfortran -arch i386 static flag -static works... no
checking if gfortran -arch i386 supports -c -o file.o... yes
checking if gfortran -arch i386 supports -c -o file.o... (cached) yes
checking whether the gfortran -arch i386 linker (/usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin8.11.1 dyld
checking how to hardcode library paths into programs... immediate
checking for sin in -lm... yes
checking for library containing dlopen... none required
checking readline/history.h usability... yes
checking readline/history.h presence... yes
checking for readline/history.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking for rl_callback_read_char in -lreadline... yes
checking for history_truncate_file... yes
checking whether rl_completion_matches exists and is declared... yes
checking for ANSI C header files... (cached) yes
checking whether time.h and sys/time.h may both be included... yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dl.h usability... no
checking dl.h presence... no
checking for dl.h... no
checking for dlfcn.h... (cached) yes
checking elf.h usability... no
checking elf.h presence... no
checking for elf.h... no
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking fpu_control.h usability... no
checking fpu_control.h presence... no
checking for fpu_control.h... no
checking glob.h usability... yes
checking glob.h presence... yes
checking for glob.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking for strings.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking time.h usability... yes
checking time.h presence... yes
checking for time.h... yes
checking for unistd.h... (cached) yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking for inttypes.h... (cached) yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking for stdint.h... (cached) yes
checking for string.h... (cached) yes
checking whether setjmp.h is POSIX.1 compatible... yes
checking whether sigsetjmp is declared... yes
checking whether siglongjmp is declared... yes
checking for GNU C library with version >= 2... 
rm: conftest.dSYM: is a directory
no
checking return type of signal handlers... void
checking for pid_t... yes
checking for size_t... yes
checking whether SIZE_MAX is declared... yes
checking for blkcnt_t... yes
checking for type of socket length... socklen_t *
checking for stack_t... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for gcc -arch i386 -std=gnu99 option to accept ISO C99... none needed
checking for gcc -arch i386 -std=gnu99 option to accept ISO Standard C... (cached) none needed
checking for inline... inline
checking for int... yes
checking size of int... 4
checking for long... yes
checking size of long... 4
checking for long long... yes
checking size of long long... 8
checking for double... yes
checking size of double... 8
checking for long double... yes
checking size of long double... 16
checking for size_t... (cached) yes
checking size of size_t... 4
checking whether we can compute C Make dependencies... yes, using gcc -arch i386 -std=gnu99 -MM
checking whether gcc -arch i386 -std=gnu99 supports -c -o FILE.lo... yes
checking how to get verbose linking output from gfortran -arch i386... -v
checking for Fortran 77 libraries of gfortran -arch i386...  -L/usr/local/lib -L/usr/lib/gcc/i686-apple-darwin8/4.2.1 -L/usr/lib/gcc/i686-apple-darwin8/4.2.1/../../.. -lgfortranbegin -lgfortran
checking how to get verbose linking output from gcc -arch i386 -std=gnu99... -v
checking for C libraries of gcc -arch i386 -std=gnu99...  -L/usr/local/lib -L/usr/lib/gcc/i686-apple-darwin8/4.2.1 -L/usr/lib/gcc/i686-apple-darwin8/4.2.1/../../.. -lgcc_s.10.4 -lSystem
checking for dummy main to link with Fortran 77 libraries... 
rm: conftest.dSYM: is a directory
none
checking for Fortran 77 name-mangling scheme... 
rm: conftest.dSYM: is a directory
lower case, underscore, no extra underscore
checking whether gfortran -arch i386 appends underscores to external names... yes
checking whether gfortran -arch i386 appends extra underscores to external names... no
checking whether mixed C/Fortran code can be run... yes
checking whether gfortran -arch i386 and gcc -arch i386 -std=gnu99 agree on int and double... yes
checking whether gfortran -arch i386 and gcc -arch i386 -std=gnu99 agree on double complex... yes
checking whether g++ -arch i386 accepts -M for generating dependencies... yes
checking whether we can compute ObjC Make dependencies... yes, using gcc -arch i386 -std=gnu99 -MM
checking for ObjC runtime library... -lobjc
checking for ObjC runtime style... next
checking for cached Foundation settings... no
checking whether default Foundation framework works... no
checking whether -framework Foundation works... yes
checking for working Foundation implementation... yes
checking whether C runtime needs -D__NO_MATH_INLINES... no
checking for xmkmf... /usr/X11R6/bin/xmkmf
checking whether linker supports dynamic lookup... yes
checking for off_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking whether alloca is declared... yes
checking whether expm1 exists and is declared... yes
checking whether hypot exists and is declared... yes
checking whether log1p exists and is declared... yes
checking whether log2 exists and is declared... yes
checking whether log10 exists and is declared... yes
checking whether rint exists and is declared... yes
checking for fseeko... yes
checking for ftello... yes
checking for isblank... yes
checking for matherr... yes
checking whether fcntl exists and is declared... yes
checking whether getgrgid exists and is declared... yes
checking whether getpwuid exists and is declared... yes
checking whether sigaction exists and is declared... yes
checking whether sigaltstack exists and is declared... yes
checking whether sigemptyset exists and is declared... yes
checking whether va_copy exists and is declared... yes
checking whether __va_copy exists and is declared... yes
checking whether fdopen exists and is declared... yes
checking whether popen exists and is declared... yes
checking whether setenv exists and is declared... yes
checking whether system exists and is declared... yes
checking whether unsetenv exists and is declared... yes
checking whether strcoll exists and is declared... yes
checking whether getrlimit exists and is declared... yes
checking whether getrusage exists and is declared... yes
checking whether chmod exists and is declared... yes
checking whether mkfifo exists and is declared... yes
checking whether stat exists and is declared... yes
checking whether umask exists and is declared... yes
checking whether gettimeofday exists and is declared... yes
checking whether times exists and is declared... yes
checking whether time exists and is declared... yes
checking whether access exists and is declared... yes
checking whether chdir exists and is declared... yes
checking whether execv exists and is declared... yes
checking whether ftruncate exists and is declared... yes
checking whether getcwd exists and is declared... yes
checking whether getuid exists and is declared... yes
checking whether symlink exists and is declared... yes
checking whether sysconf exists and is declared... yes
checking for putenv... yes
checking whether putenv is declared... yes
checking for vasprintf... yes
checking whether vasprintf is declared... yes
checking for mempcpy... no
checking for realpath... yes
checking whether realpath is declared... yes
checking whether glob exists and is declared... yes
checking for isnan... yes
checking whether isfinite is declared... yes
checking whether isnan is declared... yes
checking whether you have IEEE 754 floating-point arithmetic... yes
checking whether putenv("FOO") can unset an environment variable... no
checking whether putenv("FOO=") can unset an environment variable... no
checking for nl_langinfo and CODESET... yes
checking for acosh... yes
checking for asinh... yes
checking for atanh... yes
checking for mkdtemp... yes
checking for snprintf... yes
checking for strdup... yes
checking for strncasecmp... yes
checking for vsnprintf... yes
checking whether acosh is declared... yes
checking whether asinh is declared... yes
checking whether atanh is declared... yes
checking whether mkdtemp is declared... yes
checking whether snprintf is declared... yes
checking whether strdup is declared... yes
checking whether strncasecmp is declared... yes
checking whether vsnprintf is declared... yes
checking for library containing connect... none required
checking for library containing gethostbyname... none required
checking for library containing xdr_string... none required
checking for __setfpucw... no
checking for working calloc... yes
checking for working isfinite... yes
checking for working log1p... yes
checking whether ftell works correctly on files opened for append... yes
checking for working sigaction... yes
checking whether mktime sets errno... no
checking whether C99 double complex is supported... 
checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking for double complex... yes
checking whether cexp exists and is declared... yes
checking whether clog exists and is declared... yes
checking whether csqrt exists and is declared... yes
checking whether cpow exists and is declared... yes
checking whether ccos exists and is declared... yes
checking whether csin exists and is declared... yes
checking whether ctan exists and is declared... yes
checking whether cacos exists and is declared... yes
checking whether casin exists and is declared... yes
checking whether catan exists and is declared... yes
checking whether ccosh exists and is declared... yes
checking whether csinh exists and is declared... yes
checking whether ctanh exists and is declared... yes
checking whether cacosh exists and is declared... yes
checking whether casinh exists and is declared... yes
checking whether catanh exists and is declared... yes
checking whether C99 double complex is compatible with Rcomplex... yes
yes
checking for cblas_cdotu_sub in vecLib framework... -framework vecLib
checking iconv.h usability... yes
checking iconv.h presence... yes
checking for iconv.h... yes
checking for iconv... in libiconv
checking whether iconv accepts "UTF-8", "latin1" and "UCS-*"... yes
checking for iconvlist... yes
checking wchar.h usability... yes
checking wchar.h presence... yes
checking for wchar.h... yes
checking wctype.h usability... yes
checking wctype.h presence... yes
checking for wctype.h... yes
checking whether mbrtowc exists and is declared... yes
checking whether wcrtomb exists and is declared... yes
checking whether wcscoll exists and is declared... yes
checking whether wcsftime exists and is declared... yes
checking whether wcstod exists and is declared... yes
checking whether mbstowcs exists and is declared... yes
checking whether wcstombs exists and is declared... yes
checking whether wctrans exists and is declared... yes
checking whether iswblank exists and is declared... yes
checking whether wctype exists and is declared... yes
checking whether iswctype exists and is declared... yes
checking for wctrans_t... yes
checking for mbstate_t... yes
checking for ICU... no
checking for ucol_open in -licucore... yes
checking for X... libraries /usr/X11R6/lib, headers 
checking whether -R must be followed by a space... no
checking for gethostbyname... yes
checking for connect... yes
checking for remove... yes
checking for shmat... yes
checking for IceConnectionNumber in -lICE... yes
checking X11/Intrinsic.h usability... yes
checking X11/Intrinsic.h presence... yes
checking for X11/Intrinsic.h... yes
checking for XtToolkitInitialize in -lXt... yes
using X11 ... yes
checking for KeySym... yes
checking X11/Xmu/Atoms.h usability... yes
checking X11/Xmu/Atoms.h presence... yes
checking for X11/Xmu/Atoms.h... yes
checking for XmuInternAtom in -lXmu... yes
checking whether pkg-config knows about cairo and pango... no
checking whether pkg-config knows about cairo... yes
checking whether cairo is >= 1.0 and works... yes
checking for CFStringGetSystemEncoding in CoreFoundation framework... -framework CoreFoundation
checking for tclConfig.sh... no
checking for tclConfig.sh in library (sub)directories... /usr/local/lib/tclConfig.sh
checking for tkConfig.sh... no
checking for tkConfig.sh in library (sub)directories... /usr/local/lib/tkConfig.sh
checking tcl.h usability... yes
checking tcl.h presence... yes
checking for tcl.h... yes
checking tk.h usability... yes
checking tk.h presence... yes
checking for tk.h... yes
checking whether compiling/linking Tcl/Tk code works... yes
checking for BSD networking... yes
checking if jpeglib version >= 6b... 
rm: conftest.dSYM: is a directory
yes
checking for jpeg_destroy_compress in -ljpeg... yes
checking for main in -lz... yes
checking if libpng version >= 1.0.5... 
rm: conftest.dSYM: is a directory
yes
checking for png_create_write_struct in -lpng... yes
checking rpc/types.h usability... yes
checking rpc/types.h presence... yes
checking for rpc/types.h... yes
checking for rpc/xdr.h... yes
checking for XDR support... yes
checking for gzeof in -lz... yes
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
checking if zlib version >= 1.2.3... yes
checking whether zlib support needs to be compiled... no
checking whether bzip2 support needs to be compiled... yes
checking whether PCRE support needs to be compiled... yes
checking tiffio.h usability... yes
checking tiffio.h presence... yes
checking for tiffio.h... yes
checking for TIFFOpen in -ltiff... no
checking whether leap seconds are treated according to POSIX... yes
checking for setitimer... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no

rm: conftest.dSYM: is a directory
checking for _LARGEFILE_SOURCE value needed for large files... no

rm: conftest.dSYM: is a directory
checking whether KERN_USRSTACK sysctl is supported... yes
checking for lpr... lpr
checking for paperconf... false
checking for java... /usr/bin/java
checking for javac... /usr/bin/javac
checking for javah... /usr/bin/javah
checking for jar... /usr/bin/jar
checking whether Java compiler works... yes
checking whether Java compiler works for version 1.4... yes
checking whether Java interpreter works... yes
checking Java environment... /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home
checking for cached Java settings... no
checking whether JNI programs can be compiled... yes
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran -arch i386 accepts -g... yes
checking whether we are using the GNU Fortran compiler... (cached) yes
checking whether gfortran -arch i386 accepts -g... (cached) yes

rm: conftest.dSYM: is a directory
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gfortran -arch i386 option to produce PIC... -fno-common
checking if gfortran -arch i386 PIC flag -fno-common works... yes
checking if gfortran -arch i386 static flag -static works... no
checking if gfortran -arch i386 supports -c -o file.o... yes
checking if gfortran -arch i386 supports -c -o file.o... (cached) yes
checking whether the gfortran -arch i386 linker (/usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin8.11.1 dyld
checking how to hardcode library paths into programs... immediate
checking for Fortran flag to compile .f90 files... none
checking for Fortran flag to compile .f95 files... none
checking for recommended packages... yes
checking whether NLS is requested... yes
checking whether make sets $(MAKE)... yes
checking for a thread-safe mkdir -p... ../../R-2.9-branch/tools/install-sh -c -d
checking for msgfmt... no
checking for gmsgfmt... :
checking for xgettext... no
checking for msgmerge... no
checking whether we are using the GNU C Library 2 or newer... no
checking for ranlib... (cached) ranlib
checking for simple visibility declarations... yes
checking for inline... inline
checking for stdint.h... yes
checking for stdlib.h... (cached) yes
checking for unistd.h... (cached) yes
checking for getpagesize... yes
checking for working mmap... yes
checking whether integer division by zero raises SIGFPE... yes
checking for inttypes.h... yes
checking for unsigned long long int... yes
checking for inttypes.h... (cached) yes
checking whether the inttypes.h PRIxNN macros are broken... no
checking for ld used by GCC... /usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld
checking if the linker (/usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld) is GNU ld... no
checking for shared library run path origin... done
checking whether imported symbols can be declared weak... no
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking for pthread_kill in -lpthread... yes
checking for pthread_rwlock_t... yes
checking for multithread API to use... posix
checking argz.h usability... no
checking argz.h presence... no
checking for argz.h... no
checking for inttypes.h... (cached) yes
checking for limits.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for getcwd... yes
checking for getegid... yes
checking for geteuid... yes
checking for getgid... yes
checking for getuid... yes
checking for mempcpy... (cached) no
checking for munmap... yes
checking for stpcpy... yes
checking for strcasecmp... yes
checking for strdup... (cached) yes
checking for strtoul... yes
checking for tsearch... yes
checking for argz_count... no
checking for argz_stringify... no
checking for argz_next... no
checking for __fsetlocking... no
checking whether feof_unlocked is declared... yes
checking whether fgets_unlocked is declared... no
checking for iconv... yes
checking for iconv declaration... 
         extern size_t iconv (iconv_t cd, const char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for NL_LOCALE_NAME macro... no
checking for bison... bison
checking version of bison... 1.28, ok
checking for long long int... yes
checking for long double... yes
checking for wchar_t... yes
checking for wint_t... yes
checking for intmax_t... yes
checking whether printf() supports POSIX/XSI format strings... yes
checking whether we are using the GNU C Library 2.1 or newer... 
rm: conftest.dSYM: is a directory
no
checking for stdint.h... (cached) yes
checking for SIZE_MAX... 
rm: conftest.dSYM: is a directory
yes
checking for stdint.h... (cached) yes
checking for CFPreferencesCopyAppValue... yes
checking for CFLocaleCopyCurrent... yes
checking for ptrdiff_t... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for asprintf... yes
checking for fwprintf... yes
checking for putenv... (cached) yes
checking for setenv... yes
checking for setlocale... yes
checking for snprintf... (cached) yes
checking for wcslen... yes
checking whether _snprintf is declared... no
checking whether _snwprintf is declared... no
checking whether getc_unlocked is declared... yes
checking for nl_langinfo and CODESET... (cached) yes
checking for LC_MESSAGES... yes
checking for CFPreferencesCopyAppValue... (cached) yes
checking for CFLocaleCopyCurrent... (cached) yes
checking whether included gettext is requested... no
checking for GNU gettext in libc... no
checking for GNU gettext in libintl... no
checking whether to use NLS... yes
checking where the gettext function comes from... included intl directory
using as R_SHELL for scripts ... /bin/sh
configure: creating ./config.status
config.status: creating Makeconf
config.status: creating Makefile
config.status: creating doc/Makefile
config.status: creating doc/html/Makefile
config.status: creating doc/html/search/Makefile
config.status: creating doc/manual/Makefile
config.status: creating etc/Makefile
config.status: creating etc/Makeconf
config.status: creating etc/Renviron
config.status: creating etc/ldpaths
config.status: creating m4/Makefile
config.status: creating po/Makefile.in
config.status: creating share/Makefile
config.status: creating src/Makefile
config.status: creating src/appl/Makefile
config.status: creating src/extra/Makefile
config.status: creating src/extra/blas/Makefile
config.status: creating src/extra/bzip2/Makefile
config.status: creating src/extra/intl/Makefile
config.status: creating src/extra/pcre/Makefile
config.status: creating src/extra/xdr/Makefile
config.status: creating src/extra/zlib/Makefile
config.status: creating src/include/Makefile
config.status: creating src/include/Rmath.h0
config.status: creating src/include/R_ext/Makefile
config.status: creating src/library/Recommended/Makefile
config.status: creating src/library/Makefile
config.status: creating src/library/base/DESCRIPTION
config.status: creating src/library/base/Makefile
config.status: creating src/library/datasets/DESCRIPTION
config.status: creating src/library/datasets/Makefile
config.status: creating src/library/graphics/DESCRIPTION
config.status: creating src/library/graphics/Makefile
config.status: creating src/library/grDevices/DESCRIPTION
config.status: creating src/library/grDevices/Makefile
config.status: creating src/library/grDevices/src/Makefile
config.status: creating src/library/grid/DESCRIPTION
config.status: creating src/library/grid/Makefile
config.status: creating src/library/grid/src/Makefile
config.status: creating src/library/methods/DESCRIPTION
config.status: creating src/library/methods/Makefile
config.status: creating src/library/methods/src/Makefile
config.status: creating src/library/profile/Makefile
config.status: creating src/library/stats/DESCRIPTION
config.status: creating src/library/stats/Makefile
config.status: creating src/library/stats/src/Makefile
config.status: creating src/library/stats4/DESCRIPTION
config.status: creating src/library/stats4/Makefile
config.status: creating src/library/splines/DESCRIPTION
config.status: creating src/library/splines/Makefile
config.status: creating src/library/splines/src/Makefile
config.status: creating src/library/tcltk/DESCRIPTION
config.status: creating src/library/tcltk/Makefile
config.status: creating src/library/tcltk/src/Makefile
config.status: creating src/library/tools/DESCRIPTION
config.status: creating src/library/tools/Makefile
config.status: creating src/library/tools/src/Makefile
config.status: creating src/library/utils/DESCRIPTION
config.status: creating src/library/utils/Makefile
config.status: creating src/main/Makefile
config.status: creating src/modules/Makefile
config.status: creating src/modules/X11/Makefile
config.status: creating src/modules/internet/Makefile
config.status: creating src/modules/lapack/Makefile
config.status: creating src/modules/vfonts/Makefile
config.status: creating src/nmath/Makefile
config.status: creating src/nmath/standalone/Makefile
config.status: creating src/scripts/Makefile
config.status: creating src/scripts/R.sh
config.status: creating src/scripts/Rcmd
config.status: creating src/scripts/Rdconv
config.status: creating src/scripts/Rdiff
config.status: creating src/scripts/Rprof
config.status: creating src/scripts/Sd2Rd
config.status: creating src/scripts/build
config.status: creating src/scripts/check
config.status: creating src/scripts/f77_f2c
config.status: creating src/scripts/mkinstalldirs
config.status: creating src/scripts/pager
config.status: creating src/unix/Makefile
config.status: creating tests/Makefile
config.status: creating tests/Embedding/Makefile
config.status: creating tests/Examples/Makefile
config.status: creating tests/Native/Makefile
config.status: creating tools/Makefile
config.status: creating src/include/config.h
config.status: executing libtool commands
config.status: executing po-directories commands
config.status: creating po/POTFILES
config.status: creating po/Makefile
config.status: executing stamp-h commands

R is now configured for i386-apple-darwin8.11.1

  Source directory:          ../../R-2.9-branch
  Installation directory:    /Library/Frameworks

  C compiler:                gcc -arch i386 -std=gnu99  -mtune=core2 -g -O2
  Fortran 77 compiler:       gfortran -arch i386  -g -O2

  C++ compiler:              g++ -arch i386  -mtune=core2 -g -O2
  Fortran 90/95 compiler:    gfortran -arch i386 -mtune=core2 -g -O2
  Obj-C compiler:	     gcc -arch i386 -std=gnu99 -mtune=core2 -g -O2

  Interfaces supported:      X11, aqua, tcltk
  External libraries:        readline
  Additional capabilities:   PNG, JPEG, iconv, MBCS, NLS, cairo, ICU
  Options enabled:           framework, shared BLAS, R profiling, Java

  Recommended packages:      yes


[[system return code 0x0]]

creating RESOURCES
creating FAQ
creating doc/html/resources.html
make[1]: Nothing to be done for `R'.
make[1]: Nothing to be done for `R'.
make[2]: Nothing to be done for `R'.
mkdir ./i386
mkdir ../share/R
mkdir ../share/encodings
mkdir ../share/java
mkdir ../share/licenses
mkdir ../share/make
mkdir ../share/perl
mkdir ../share/perl/R
mkdir ../share/perl/File
mkdir ../share/perl/File/Copy
mkdir ../share/perl/Text
mkdir ../share/sh
mkdir ../share/texmf
creating src/scripts/R.fe
mkdir ../../bin
mkdir ../../include
mkdir ../../include/i386
mkdir ../../../include/R_ext
making bzcompress.d from ../../../../../R-2.9-branch/src/extra/bzip2/bzcompress.c
making bzlib.d from ../../../../../R-2.9-branch/src/extra/bzip2/bzlib.c
making blocksort.d from ../../../../../R-2.9-branch/src/extra/bzip2/blocksort.c
making crctable.d from ../../../../../R-2.9-branch/src/extra/bzip2/crctable.c
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../../R-2.9-branch/src/extra/blas/blas.f -o blas.o
making decompress.d from ../../../../../R-2.9-branch/src/extra/bzip2/decompress.c
making pcre_chartables.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_chartables.c
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../../R-2.9-branch/src/extra/blas/cmplxblas.f -o cmplxblas.o
making huffman.d from ../../../../../R-2.9-branch/src/extra/bzip2/huffman.c
making pcre_compile.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_compile.c
making pcre_config.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_config.c
making randtable.d from ../../../../../R-2.9-branch/src/extra/bzip2/randtable.c
making huffman.d from ../../../../../R-2.9-branch/src/extra/bzip2/huffman.c
making pcre_exec.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_exec.c
making pcre_fullinfo.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_fullinfo.c
making randtable.d from ../../../../../R-2.9-branch/src/extra/bzip2/randtable.c
making pcre_get.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_get.c
making pcre_globals.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_globals.c
making bindtextdom.d from ../../../../../R-2.9-branch/src/extra/intl/bindtextdom.c
making pcre_info.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_info.c
making pcre_maketables.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_maketables.c
making pcre_newline.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_newline.c
making dcgettext.d from ../../../../../R-2.9-branch/src/extra/intl/dcgettext.c
making pcre_ord2utf8.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_ord2utf8.c
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/bzip2 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/bzip2/blocksort.c -o blocksort.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/bzip2 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/bzip2/bzlib.c -o bzlib.o
making dgettext.d from ../../../../../R-2.9-branch/src/extra/intl/dgettext.c
making pcre_refcount.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_refcount.c
making gettext.d from ../../../../../R-2.9-branch/src/extra/intl/gettext.c
making finddomain.d from ../../../../../R-2.9-branch/src/extra/intl/finddomain.c
making pcre_study.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_study.c
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/bzip2 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/bzip2/bzcompress.c -o bzcompress.o
making loadmsgcat.d from ../../../../../R-2.9-branch/src/extra/intl/loadmsgcat.c
making textdomain.d from ../../../../../R-2.9-branch/src/extra/intl/textdomain.c
making pcre_tables.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_tables.c
making pcre_try_flipped.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_try_flipped.c
making l10nflist.d from ../../../../../R-2.9-branch/src/extra/intl/l10nflist.c
making pcre_ucd.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_ucd.c
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/bzip2 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/bzip2/crctable.c -o crctable.o
making explodename.d from ../../../../../R-2.9-branch/src/extra/intl/explodename.c
making dcigettext.d from ../../../../../R-2.9-branch/src/extra/intl/dcigettext.c
making pcre_valid_utf8.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_valid_utf8.c
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/bzip2 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/bzip2/decompress.c -o decompress.o
making pcre_version.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_version.c
making dcngettext.d from ../../../../../R-2.9-branch/src/extra/intl/dcngettext.c
making pcre_xclass.d from ../../../../../R-2.9-branch/src/extra/pcre/pcre_xclass.c
making dngettext.d from ../../../../../R-2.9-branch/src/extra/intl/dngettext.c
making ngettext.d from ../../../../../R-2.9-branch/src/extra/intl/ngettext.c
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_chartables.c -o pcre_chartables.o
making plural.d from ../../../../../R-2.9-branch/src/extra/intl/plural.c
making plural-exp.d from ../../../../../R-2.9-branch/src/extra/intl/plural-exp.c
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_compile.c -o pcre_compile.o
making langprefs.d from ../../../../../R-2.9-branch/src/extra/intl/langprefs.c
making localcharset.d from ../../../../../R-2.9-branch/src/extra/intl/localcharset.c
making localename.d from ../../../../../R-2.9-branch/src/extra/intl/localename.c
making printf.d from ../../../../../R-2.9-branch/src/extra/intl/printf.c
making osdep.d from ../../../../../R-2.9-branch/src/extra/intl/osdep.c
making intl-compat.d from ../../../../../R-2.9-branch/src/extra/intl/intl-compat.c
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_config.c -o pcre_config.o
making hash-string.d from ../../../../../R-2.9-branch/src/extra/intl/hash-string.c
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_exec.c -o pcre_exec.o
making lock.d from ../../../../../R-2.9-branch/src/extra/intl/lock.c
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/bzip2 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/bzip2/huffman.c -o huffman.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/bindtextdom.c -o bindtextdom.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_fullinfo.c -o pcre_fullinfo.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/dcgettext.c -o dcgettext.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/bzip2 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/bzip2/randtable.c -o randtable.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/dgettext.c -o dgettext.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/gettext.c -o gettext.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_get.c -o pcre_get.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_globals.c -o pcre_globals.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/finddomain.c -o finddomain.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/loadmsgcat.c -o loadmsgcat.o
rm -f libbz2.a
ar cr libbz2.a blocksort.o bzlib.o bzcompress.o crctable.o decompress.o huffman.o randtable.o
ranlib libbz2.a
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_info.c -o pcre_info.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/textdomain.c -o textdomain.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_maketables.c -o pcre_maketables.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_newline.c -o pcre_newline.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/l10nflist.c -o l10nflist.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/explodename.c -o explodename.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/dcigettext.c -o dcigettext.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_ord2utf8.c -o pcre_ord2utf8.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/dcngettext.c -o dcngettext.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_refcount.c -o pcre_refcount.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_study.c -o pcre_study.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_tables.c -o pcre_tables.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/dngettext.c -o dngettext.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/ngettext.c -o ngettext.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/plural.c -o plural.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_try_flipped.c -o pcre_try_flipped.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_ucd.c -o pcre_ucd.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_valid_utf8.c -o pcre_valid_utf8.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_version.c -o pcre_version.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/plural-exp.c -o plural-exp.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/langprefs.c -o langprefs.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/localcharset.c -o localcharset.o
gcc -arch i386 -std=gnu99 -I../../../../../R-2.9-branch/src/extra/pcre -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/pcre/pcre_xclass.c -o pcre_xclass.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/localename.c -o localename.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/printf.c -o printf.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/osdep.c -o osdep.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/intl-compat.c -o intl-compat.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/hash-string.c -o hash-string.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I../../../../../R-2.9-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/extra/intl/lock.c -o lock.o

../../../../../R-2.9-branch/src/extra/intl/lock.c:363: warning: braces around scalar initializer
../../../../../R-2.9-branch/src/extra/intl/lock.c:363: warning: (near initialization for 'fresh_once.__sig')
../../../../../R-2.9-branch/src/extra/intl/lock.c:363: warning: braces around scalar initializer
../../../../../R-2.9-branch/src/extra/intl/lock.c:363: warning: (near initialization for 'fresh_once.__sig')
../../../../../R-2.9-branch/src/extra/intl/lock.c:363: warning: excess elements in scalar initializer
../../../../../R-2.9-branch/src/extra/intl/lock.c:363: warning: (near initialization for 'fresh_once.__sig')
rm -f libintl.a
ar cr libintl.a bindtextdom.o dcgettext.o dgettext.o gettext.o finddomain.o loadmsgcat.o textdomain.o l10nflist.o explodename.o dcigettext.o dcngettext.o dngettext.o ngettext.o plural.o plural-exp.o langprefs.o localcharset.o localename.o printf.o osdep.o intl-compat.o hash-string.o lock.o

ranlib: file: libintl.a(printf.o) has no symbols
ranlib: file: libintl.a(osdep.o) has no symbols
ranlib libintl.a

ranlib: file: libintl.a(printf.o) has no symbols
ranlib: file: libintl.a(osdep.o) has no symbols
rm -f libpcre.a
ar cr libpcre.a pcre_chartables.o pcre_compile.o pcre_config.o pcre_exec.o pcre_fullinfo.o pcre_get.o pcre_globals.o pcre_info.o pcre_maketables.o pcre_newline.o pcre_ord2utf8.o pcre_refcount.o pcre_study.o pcre_tables.o pcre_try_flipped.o pcre_ucd.o pcre_valid_utf8.o pcre_version.o pcre_xclass.o
ranlib libpcre.a
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o libRblas.dylib blas.o  cmplxblas.o -install_name libRblas.dylib -headerpad_max_install_names -lgfortran # xerbla.o
mkdir /Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib
mkdir /Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386
making bakslv.d from ../../../../R-2.9-branch/src/appl/bakslv.c
making binning.d from ../../../../R-2.9-branch/src/appl/binning.c
making fft.d from ../../../../R-2.9-branch/src/appl/fft.c
making interv.d from ../../../../R-2.9-branch/src/appl/interv.c
making cpoly.d from ../../../../R-2.9-branch/src/appl/cpoly.c
making cumsum.d from ../../../../R-2.9-branch/src/appl/cumsum.c
making fmin.d from ../../../../R-2.9-branch/src/appl/fmin.c
making integrate.d from ../../../../R-2.9-branch/src/appl/integrate.c
making lbfgsb.d from ../../../../R-2.9-branch/src/appl/lbfgsb.c
making machar.d from ../../../../R-2.9-branch/src/appl/machar.c
making maxcol.d from ../../../../R-2.9-branch/src/appl/maxcol.c
making pretty.d from ../../../../R-2.9-branch/src/appl/pretty.c
making rowsum.d from ../../../../R-2.9-branch/src/appl/rowsum.c
making stem.d from ../../../../R-2.9-branch/src/appl/stem.c
making rcont.d from ../../../../R-2.9-branch/src/appl/rcont.c
making strsignif.d from ../../../../R-2.9-branch/src/appl/strsignif.c
making tabulate.d from ../../../../R-2.9-branch/src/appl/tabulate.c
making uncmin.d from ../../../../R-2.9-branch/src/appl/uncmin.c
making zeroin.d from ../../../../R-2.9-branch/src/appl/zeroin.c
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/bakslv.c -o bakslv.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/binning.c -o binning.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/cpoly.c -o cpoly.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/cumsum.c -o cumsum.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/fft.c -o fft.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/fmin.c -o fmin.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/integrate.c -o integrate.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/interv.c -o interv.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/lbfgsb.c -o lbfgsb.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/machar.c -o machar.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/maxcol.c -o maxcol.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/pretty.c -o pretty.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/rcont.c -o rcont.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/rowsum.c -o rowsum.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/stem.c -o stem.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/strsignif.c -o strsignif.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/tabulate.c -o tabulate.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/uncmin.c -o uncmin.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/appl/zeroin.c -o zeroin.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/ch2inv.f -o ch2inv.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/chol.f -o chol.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dchdc.f -o dchdc.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dpbfa.f -o dpbfa.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dpbsl.f -o dpbsl.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dpoco.f -o dpoco.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dpodi.f -o dpodi.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dpofa.f -o dpofa.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dposl.f -o dposl.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dqrdc.f -o dqrdc.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dqrdc2.f -o dqrdc2.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dqrls.f -o dqrls.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dqrsl.f -o dqrsl.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dqrutl.f -o dqrutl.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dsvdc.f -o dsvdc.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dtrco.f -o dtrco.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/dtrsl.f -o dtrsl.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/appl/eigen.f -o eigen.o
rm -f libappl.a
ar cr libappl.a bakslv.o binning.o cpoly.o cumsum.o fft.o fmin.o integrate.o interv.o lbfgsb.o machar.o maxcol.o pretty.o rcont.o rowsum.o stem.o strsignif.o tabulate.o uncmin.o zeroin.o ch2inv.o chol.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o eigen.o 
ranlib libappl.a
making mlutils.d from ../../../../R-2.9-branch/src/nmath/mlutils.c
making d1mach.d from ../../../../R-2.9-branch/src/nmath/d1mach.c
making i1mach.d from ../../../../R-2.9-branch/src/nmath/i1mach.c
making fmax2.d from ../../../../R-2.9-branch/src/nmath/fmax2.c
making ftrunc.d from ../../../../R-2.9-branch/src/nmath/ftrunc.c
making fprec.d from ../../../../R-2.9-branch/src/nmath/fprec.c
making fmin2.d from ../../../../R-2.9-branch/src/nmath/fmin2.c
making fround.d from ../../../../R-2.9-branch/src/nmath/fround.c
making sign.d from ../../../../R-2.9-branch/src/nmath/sign.c
making imax2.d from ../../../../R-2.9-branch/src/nmath/imax2.c
making chebyshev.d from ../../../../R-2.9-branch/src/nmath/chebyshev.c
making fsign.d from ../../../../R-2.9-branch/src/nmath/fsign.c
making imin2.d from ../../../../R-2.9-branch/src/nmath/imin2.c
making log1p.d from ../../../../R-2.9-branch/src/nmath/log1p.c
making lgammacor.d from ../../../../R-2.9-branch/src/nmath/lgammacor.c
making expm1.d from ../../../../R-2.9-branch/src/nmath/expm1.c
making gammalims.d from ../../../../R-2.9-branch/src/nmath/gammalims.c
making stirlerr.d from ../../../../R-2.9-branch/src/nmath/stirlerr.c
making bd0.d from ../../../../R-2.9-branch/src/nmath/bd0.c
making lgamma.d from ../../../../R-2.9-branch/src/nmath/lgamma.c
making gamma.d from ../../../../R-2.9-branch/src/nmath/gamma.c
making beta.d from ../../../../R-2.9-branch/src/nmath/beta.c
making gamma_cody.d from ../../../../R-2.9-branch/src/nmath/gamma_cody.c
making lbeta.d from ../../../../R-2.9-branch/src/nmath/lbeta.c
making polygamma.d from ../../../../R-2.9-branch/src/nmath/polygamma.c
making bessel_i.d from ../../../../R-2.9-branch/src/nmath/bessel_i.c
making choose.d from ../../../../R-2.9-branch/src/nmath/choose.c
making bessel_k.d from ../../../../R-2.9-branch/src/nmath/bessel_k.c
making bessel_y.d from ../../../../R-2.9-branch/src/nmath/bessel_y.c
making snorm.d from ../../../../R-2.9-branch/src/nmath/snorm.c
making bessel_j.d from ../../../../R-2.9-branch/src/nmath/bessel_j.c
making sexp.d from ../../../../R-2.9-branch/src/nmath/sexp.c
making dgamma.d from ../../../../R-2.9-branch/src/nmath/dgamma.c
making pbeta.d from ../../../../R-2.9-branch/src/nmath/pbeta.c
making qgamma.d from ../../../../R-2.9-branch/src/nmath/qgamma.c
making rgamma.d from ../../../../R-2.9-branch/src/nmath/rgamma.c
making pgamma.d from ../../../../R-2.9-branch/src/nmath/pgamma.c
making dbeta.d from ../../../../R-2.9-branch/src/nmath/dbeta.c
making qbeta.d from ../../../../R-2.9-branch/src/nmath/qbeta.c
making rbeta.d from ../../../../R-2.9-branch/src/nmath/rbeta.c
making dunif.d from ../../../../R-2.9-branch/src/nmath/dunif.c
making punif.d from ../../../../R-2.9-branch/src/nmath/punif.c
making runif.d from ../../../../R-2.9-branch/src/nmath/runif.c
making pnorm.d from ../../../../R-2.9-branch/src/nmath/pnorm.c
making dnorm.d from ../../../../R-2.9-branch/src/nmath/dnorm.c
making qunif.d from ../../../../R-2.9-branch/src/nmath/qunif.c
making rnorm.d from ../../../../R-2.9-branch/src/nmath/rnorm.c
making qnorm.d from ../../../../R-2.9-branch/src/nmath/qnorm.c
making dlnorm.d from ../../../../R-2.9-branch/src/nmath/dlnorm.c
making plnorm.d from ../../../../R-2.9-branch/src/nmath/plnorm.c
making qlnorm.d from ../../../../R-2.9-branch/src/nmath/qlnorm.c
making rlnorm.d from ../../../../R-2.9-branch/src/nmath/rlnorm.c
making rf.d from ../../../../R-2.9-branch/src/nmath/rf.c
making pf.d from ../../../../R-2.9-branch/src/nmath/pf.c
making df.d from ../../../../R-2.9-branch/src/nmath/df.c
making qf.d from ../../../../R-2.9-branch/src/nmath/qf.c
making dnf.d from ../../../../R-2.9-branch/src/nmath/dnf.c
making dt.d from ../../../../R-2.9-branch/src/nmath/dt.c
making pt.d from ../../../../R-2.9-branch/src/nmath/pt.c
making qt.d from ../../../../R-2.9-branch/src/nmath/qt.c
making dchisq.d from ../../../../R-2.9-branch/src/nmath/dchisq.c
making rt.d from ../../../../R-2.9-branch/src/nmath/rt.c
making pchisq.d from ../../../../R-2.9-branch/src/nmath/pchisq.c
making dnt.d from ../../../../R-2.9-branch/src/nmath/dnt.c
making qchisq.d from ../../../../R-2.9-branch/src/nmath/qchisq.c
making rchisq.d from ../../../../R-2.9-branch/src/nmath/rchisq.c
making rnchisq.d from ../../../../R-2.9-branch/src/nmath/rnchisq.c
making dbinom.d from ../../../../R-2.9-branch/src/nmath/dbinom.c
making pbinom.d from ../../../../R-2.9-branch/src/nmath/pbinom.c
making qbinom.d from ../../../../R-2.9-branch/src/nmath/qbinom.c
making rmultinom.d from ../../../../R-2.9-branch/src/nmath/rmultinom.c
making dcauchy.d from ../../../../R-2.9-branch/src/nmath/dcauchy.c
making rbinom.d from ../../../../R-2.9-branch/src/nmath/rbinom.c
making pcauchy.d from ../../../../R-2.9-branch/src/nmath/pcauchy.c
making qcauchy.d from ../../../../R-2.9-branch/src/nmath/qcauchy.c
making rcauchy.d from ../../../../R-2.9-branch/src/nmath/rcauchy.c
making qexp.d from ../../../../R-2.9-branch/src/nmath/qexp.c
making dexp.d from ../../../../R-2.9-branch/src/nmath/dexp.c
making rexp.d from ../../../../R-2.9-branch/src/nmath/rexp.c
making pexp.d from ../../../../R-2.9-branch/src/nmath/pexp.c
making dgeom.d from ../../../../R-2.9-branch/src/nmath/dgeom.c
making pgeom.d from ../../../../R-2.9-branch/src/nmath/pgeom.c
making qgeom.d from ../../../../R-2.9-branch/src/nmath/qgeom.c
making rgeom.d from ../../../../R-2.9-branch/src/nmath/rgeom.c
making phyper.d from ../../../../R-2.9-branch/src/nmath/phyper.c
making dhyper.d from ../../../../R-2.9-branch/src/nmath/dhyper.c
making qhyper.d from ../../../../R-2.9-branch/src/nmath/qhyper.c
making rhyper.d from ../../../../R-2.9-branch/src/nmath/rhyper.c
making dnbinom.d from ../../../../R-2.9-branch/src/nmath/dnbinom.c
making pnbinom.d from ../../../../R-2.9-branch/src/nmath/pnbinom.c
making qnbinom.d from ../../../../R-2.9-branch/src/nmath/qnbinom.c
making rnbinom.d from ../../../../R-2.9-branch/src/nmath/rnbinom.c
making dpois.d from ../../../../R-2.9-branch/src/nmath/dpois.c
making ppois.d from ../../../../R-2.9-branch/src/nmath/ppois.c
making qpois.d from ../../../../R-2.9-branch/src/nmath/qpois.c
making rpois.d from ../../../../R-2.9-branch/src/nmath/rpois.c
making dweibull.d from ../../../../R-2.9-branch/src/nmath/dweibull.c
making pweibull.d from ../../../../R-2.9-branch/src/nmath/pweibull.c
making qweibull.d from ../../../../R-2.9-branch/src/nmath/qweibull.c
making dlogis.d from ../../../../R-2.9-branch/src/nmath/dlogis.c
making rweibull.d from ../../../../R-2.9-branch/src/nmath/rweibull.c
making qlogis.d from ../../../../R-2.9-branch/src/nmath/qlogis.c
making plogis.d from ../../../../R-2.9-branch/src/nmath/plogis.c
making rlogis.d from ../../../../R-2.9-branch/src/nmath/rlogis.c
making dnchisq.d from ../../../../R-2.9-branch/src/nmath/dnchisq.c
making qnchisq.d from ../../../../R-2.9-branch/src/nmath/qnchisq.c
making pnchisq.d from ../../../../R-2.9-branch/src/nmath/pnchisq.c
making dnbeta.d from ../../../../R-2.9-branch/src/nmath/dnbeta.c
making pnbeta.d from ../../../../R-2.9-branch/src/nmath/pnbeta.c
making pnf.d from ../../../../R-2.9-branch/src/nmath/pnf.c
making qnbeta.d from ../../../../R-2.9-branch/src/nmath/qnbeta.c
making qnf.d from ../../../../R-2.9-branch/src/nmath/qnf.c
making qnt.d from ../../../../R-2.9-branch/src/nmath/qnt.c
making pnt.d from ../../../../R-2.9-branch/src/nmath/pnt.c
making ptukey.d from ../../../../R-2.9-branch/src/nmath/ptukey.c
making toms708.d from ../../../../R-2.9-branch/src/nmath/toms708.c
making signrank.d from ../../../../R-2.9-branch/src/nmath/signrank.c
making qtukey.d from ../../../../R-2.9-branch/src/nmath/qtukey.c
making wilcox.d from ../../../../R-2.9-branch/src/nmath/wilcox.c
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/mlutils.c -o mlutils.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/d1mach.c -o d1mach.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/i1mach.c -o i1mach.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/fmax2.c -o fmax2.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/fmin2.c -o fmin2.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/fprec.c -o fprec.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/fround.c -o fround.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/ftrunc.c -o ftrunc.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/sign.c -o sign.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/fsign.c -o fsign.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/imax2.c -o imax2.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/imin2.c -o imin2.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/chebyshev.c -o chebyshev.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/log1p.c -o log1p.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/expm1.c -o expm1.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/lgammacor.c -o lgammacor.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/gammalims.c -o gammalims.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/stirlerr.c -o stirlerr.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/bd0.c -o bd0.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/gamma.c -o gamma.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/lgamma.c -o lgamma.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/gamma_cody.c -o gamma_cody.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/beta.c -o beta.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/lbeta.c -o lbeta.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/polygamma.c -o polygamma.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/bessel_i.c -o bessel_i.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/bessel_j.c -o bessel_j.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/bessel_k.c -o bessel_k.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/bessel_y.c -o bessel_y.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/choose.c -o choose.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/snorm.c -o snorm.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/sexp.c -o sexp.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dgamma.c -o dgamma.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pgamma.c -o pgamma.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qgamma.c -o qgamma.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rgamma.c -o rgamma.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dbeta.c -o dbeta.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pbeta.c -o pbeta.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qbeta.c -o qbeta.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rbeta.c -o rbeta.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dunif.c -o dunif.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/punif.c -o punif.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qunif.c -o qunif.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/runif.c -o runif.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dnorm.c -o dnorm.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pnorm.c -o pnorm.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qnorm.c -o qnorm.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rnorm.c -o rnorm.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dlnorm.c -o dlnorm.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/plnorm.c -o plnorm.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qlnorm.c -o qlnorm.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rlnorm.c -o rlnorm.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/df.c -o df.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pf.c -o pf.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qf.c -o qf.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rf.c -o rf.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dnf.c -o dnf.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dt.c -o dt.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pt.c -o pt.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qt.c -o qt.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rt.c -o rt.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dnt.c -o dnt.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dchisq.c -o dchisq.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pchisq.c -o pchisq.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qchisq.c -o qchisq.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rchisq.c -o rchisq.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rnchisq.c -o rnchisq.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dbinom.c -o dbinom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pbinom.c -o pbinom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qbinom.c -o qbinom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rbinom.c -o rbinom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rmultinom.c -o rmultinom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dcauchy.c -o dcauchy.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pcauchy.c -o pcauchy.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qcauchy.c -o qcauchy.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rcauchy.c -o rcauchy.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dexp.c -o dexp.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pexp.c -o pexp.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qexp.c -o qexp.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rexp.c -o rexp.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dgeom.c -o dgeom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pgeom.c -o pgeom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qgeom.c -o qgeom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rgeom.c -o rgeom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dhyper.c -o dhyper.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/phyper.c -o phyper.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qhyper.c -o qhyper.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rhyper.c -o rhyper.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dnbinom.c -o dnbinom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pnbinom.c -o pnbinom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qnbinom.c -o qnbinom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rnbinom.c -o rnbinom.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dpois.c -o dpois.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/ppois.c -o ppois.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qpois.c -o qpois.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rpois.c -o rpois.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dweibull.c -o dweibull.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pweibull.c -o pweibull.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qweibull.c -o qweibull.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rweibull.c -o rweibull.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dlogis.c -o dlogis.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/plogis.c -o plogis.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qlogis.c -o qlogis.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/rlogis.c -o rlogis.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dnchisq.c -o dnchisq.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pnchisq.c -o pnchisq.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qnchisq.c -o qnchisq.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/dnbeta.c -o dnbeta.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pnbeta.c -o pnbeta.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qnbeta.c -o qnbeta.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pnf.c -o pnf.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/pnt.c -o pnt.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qnf.c -o qnf.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qnt.c -o qnt.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/ptukey.c -o ptukey.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/qtukey.c -o qtukey.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/toms708.c -o toms708.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/wilcox.c -o wilcox.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/nmath/signrank.c -o signrank.o
rm -rf libnmath.a
ar cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o

ranlib: file: libnmath.a(mlutils.o) has no symbols
ranlib: file: libnmath.a(expm1.o) has no symbols
ranlib libnmath.a

ranlib: file: libnmath.a(mlutils.o) has no symbols
ranlib: file: libnmath.a(expm1.o) has no symbols
config.status: creating src/unix/Makefile
making stubs.d from ../../../../R-2.9-branch/src/unix/stubs.c
making system.d from ../../../../R-2.9-branch/src/unix/system.c
making dynload.d from ../../../../R-2.9-branch/src/unix/dynload.c
making aqua.d from ../../../../R-2.9-branch/src/unix/aqua.c
making sys-unix.d from ../../../../R-2.9-branch/src/unix/sys-unix.c
making edit.d from ../../../../R-2.9-branch/src/unix/edit.c
making sys-std.d from ../../../../R-2.9-branch/src/unix/sys-std.c
making X11.d from ../../../../R-2.9-branch/src/unix/X11.c
making Rembedded.d from ../../../../R-2.9-branch/src/unix/Rembedded.c
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include  -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/unix/dynload.c -o dynload.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include  -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/unix/edit.c -o edit.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include  -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/unix/stubs.c -o stubs.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include  -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/unix/system.c -o system.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include  -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/unix/sys-unix.c -o sys-unix.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include  -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/unix/sys-std.c -o sys-std.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include  -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/unix/X11.c -o X11.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include  -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/unix/aqua.c -o aqua.o
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include  -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/unix/Rembedded.c -o Rembedded.o
rm -rf libunix.a
ar cr libunix.a dynload.o edit.o stubs.o system.o sys-unix.o sys-std.o X11.o aqua.o Rembedded.o 
ranlib libunix.a
gcc -arch i386 -std=gnu99 -I. -I../../src/include -I../../../../R-2.9-branch/src/include  -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -DR_HOME='"/Builds/R-builds/nightly/tiger-i386/R-2.9-branch"' -o Rscript \
  ../../../../R-2.9-branch/src/unix/Rscript.c
config.status: creating src/main/Makefile
making CConverters.d from ../../../../R-2.9-branch/src/main/CConverters.c
making RNG.d from ../../../../R-2.9-branch/src/main/RNG.c
making Rdynload.d from ../../../../R-2.9-branch/src/main/Rdynload.c
making apse.d from ../../../../R-2.9-branch/src/main/apse.c
making CommandLineArgs.d from ../../../../R-2.9-branch/src/main/CommandLineArgs.c
making apply.d from ../../../../R-2.9-branch/src/main/apply.c
making Renviron.d from ../../../../R-2.9-branch/src/main/Renviron.c
making arithmetic.d from ../../../../R-2.9-branch/src/main/arithmetic.c
making array.d from ../../../../R-2.9-branch/src/main/array.c
making base.d from ../../../../R-2.9-branch/src/main/base.c
making attrib.d from ../../../../R-2.9-branch/src/main/attrib.c
making bind.d from ../../../../R-2.9-branch/src/main/bind.c
making coerce.d from ../../../../R-2.9-branch/src/main/coerce.c
making builtin.d from ../../../../R-2.9-branch/src/main/builtin.c
making colors.d from ../../../../R-2.9-branch/src/main/colors.c
making character.d from ../../../../R-2.9-branch/src/main/character.c
making complex.d from ../../../../R-2.9-branch/src/main/complex.c
making context.d from ../../../../R-2.9-branch/src/main/context.c
making connections.d from ../../../../R-2.9-branch/src/main/connections.c
making cov.d from ../../../../R-2.9-branch/src/main/cov.c
making cum.d from ../../../../R-2.9-branch/src/main/cum.c
making dcf.d from ../../../../R-2.9-branch/src/main/dcf.c
making datetime.d from ../../../../R-2.9-branch/src/main/datetime.c
making debug.d from ../../../../R-2.9-branch/src/main/debug.c
making deparse.d from ../../../../R-2.9-branch/src/main/deparse.c
making deriv.d from ../../../../R-2.9-branch/src/main/deriv.c
making devices.d from ../../../../R-2.9-branch/src/main/devices.c
making dounzip.d from ../../../../R-2.9-branch/src/main/dounzip.c
making dotcode.d from ../../../../R-2.9-branch/src/main/dotcode.c
making dstruct.d from ../../../../R-2.9-branch/src/main/dstruct.c
making duplicate.d from ../../../../R-2.9-branch/src/main/duplicate.c
making engine.d from ../../../../R-2.9-branch/src/main/engine.c
making envir.d from ../../../../R-2.9-branch/src/main/envir.c
making errors.d from ../../../../R-2.9-branch/src/main/errors.c
making eval.d from ../../../../R-2.9-branch/src/main/eval.c
making format.d from ../../../../R-2.9-branch/src/main/format.c
making gram.d from ../../../../R-2.9-branch/src/main/gram.c
making gram-ex.d from ../../../../R-2.9-branch/src/main/gram-ex.c
making fourier.d from ../../../../R-2.9-branch/src/main/fourier.c
making gevents.d from ../../../../R-2.9-branch/src/main/gevents.c
making gramRd.d from ../../../../R-2.9-branch/src/main/gramRd.c
making graphics.d from ../../../../R-2.9-branch/src/main/graphics.c
making identical.d from ../../../../R-2.9-branch/src/main/identical.c
making inspect.d from ../../../../R-2.9-branch/src/main/inspect.c
making internet.d from ../../../../R-2.9-branch/src/main/internet.c
making inlined.d from ../../../../R-2.9-branch/src/main/inlined.c
making iosupport.d from ../../../../R-2.9-branch/src/main/iosupport.c
making lapack.d from ../../../../R-2.9-branch/src/main/lapack.c
making list.d from ../../../../R-2.9-branch/src/main/list.c
making localecharset.d from ../../../../R-2.9-branch/src/main/localecharset.c
making logic.d from ../../../../R-2.9-branch/src/main/logic.c
making main.d from ../../../../R-2.9-branch/src/main/main.c
making mapply.d from ../../../../R-2.9-branch/src/main/mapply.c
making names.d from ../../../../R-2.9-branch/src/main/names.c
making model.d from ../../../../R-2.9-branch/src/main/model.c
making memory.d from ../../../../R-2.9-branch/src/main/memory.c
making match.d from ../../../../R-2.9-branch/src/main/match.c
making optim.d from ../../../../R-2.9-branch/src/main/optim.c
making objects.d from ../../../../R-2.9-branch/src/main/objects.c
making optimize.d from ../../../../R-2.9-branch/src/main/optimize.c
making options.d from ../../../../R-2.9-branch/src/main/options.c
making par.d from ../../../../R-2.9-branch/src/main/par.c
making paste.d from ../../../../R-2.9-branch/src/main/paste.c
making pcre.d from ../../../../R-2.9-branch/src/main/pcre.c
making plot.d from ../../../../R-2.9-branch/src/main/plot.c
making plot3d.d from ../../../../R-2.9-branch/src/main/plot3d.c
making platform.d from ../../../../R-2.9-branch/src/main/platform.c
making plotmath.d from ../../../../R-2.9-branch/src/main/plotmath.c
making print.d from ../../../../R-2.9-branch/src/main/print.c
making printarray.d from ../../../../R-2.9-branch/src/main/printarray.c
making printvector.d from ../../../../R-2.9-branch/src/main/printvector.c
making qsort.d from ../../../../R-2.9-branch/src/main/qsort.c
making random.d from ../../../../R-2.9-branch/src/main/random.c
making printutils.d from ../../../../R-2.9-branch/src/main/printutils.c
making regex.d from ../../../../R-2.9-branch/src/main/regex.c
making registration.d from ../../../../R-2.9-branch/src/main/registration.c
making relop.d from ../../../../R-2.9-branch/src/main/relop.c
making rlocale.d from ../../../../R-2.9-branch/src/main/rlocale.c
making saveload.d from ../../../../R-2.9-branch/src/main/saveload.c
making scan.d from ../../../../R-2.9-branch/src/main/scan.c
making seq.d from ../../../../R-2.9-branch/src/main/seq.c
making source.d from ../../../../R-2.9-branch/src/main/source.c
making serialize.d from ../../../../R-2.9-branch/src/main/serialize.c
making size.d from ../../../../R-2.9-branch/src/main/size.c
making sort.d from ../../../../R-2.9-branch/src/main/sort.c
making split.d from ../../../../R-2.9-branch/src/main/split.c
making sprintf.d from ../../../../R-2.9-branch/src/main/sprintf.c
making startup.d from ../../../../R-2.9-branch/src/main/startup.c
making subassign.d from ../../../../R-2.9-branch/src/main/subassign.c
making sysutils.d from ../../../../R-2.9-branch/src/main/sysutils.c
making subset.d from ../../../../R-2.9-branch/src/main/subset.c
making summary.d from ../../../../R-2.9-branch/src/main/summary.c
making subscript.d from ../../../../R-2.9-branch/src/main/subscript.c
making unique.d from ../../../../R-2.9-branch/src/main/unique.c
making util.d from ../../../../R-2.9-branch/src/main/util.c
making version.d from ../../../../R-2.9-branch/src/main/version.c
making alloca.d from ../../../../R-2.9-branch/src/main/alloca.c
making vfonts.d from ../../../../R-2.9-branch/src/main/vfonts.c
making acosh.d from ../../../../R-2.9-branch/src/main/acosh.c
making atanh.d from ../../../../R-2.9-branch/src/main/atanh.c
making Rmain.d from ../../../../R-2.9-branch/src/main/Rmain.c
making asinh.d from ../../../../R-2.9-branch/src/main/asinh.c
making mkdtemp.d from ../../../../R-2.9-branch/src/main/mkdtemp.c
making strdup.d from ../../../../R-2.9-branch/src/main/strdup.c
making xspline.d from ../../../../R-2.9-branch/src/main/xspline.c
making snprintf.d from ../../../../R-2.9-branch/src/main/snprintf.c
making vsnprintf.d from ../../../../R-2.9-branch/src/main/vsnprintf.c
making strncasecmp.d from ../../../../R-2.9-branch/src/main/strncasecmp.c
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/CConverters.c -o CConverters.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/CommandLineArgs.c -o CommandLineArgs.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/Rdynload.c -o Rdynload.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/Renviron.c -o Renviron.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/RNG.c -o RNG.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/apply.c -o apply.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/apse.c -o apse.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/arithmetic.c -o arithmetic.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/array.c -o array.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/attrib.c -o attrib.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/base.c -o base.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/bind.c -o bind.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/builtin.c -o builtin.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/character.c -o character.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/coerce.c -o coerce.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/colors.c -o colors.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/complex.c -o complex.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/connections.c -o connections.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/context.c -o context.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/cov.c -o cov.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/cum.c -o cum.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/dcf.c -o dcf.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/datetime.c -o datetime.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/debug.c -o debug.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/deparse.c -o deparse.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/deriv.c -o deriv.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/devices.c -o devices.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/dotcode.c -o dotcode.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/dounzip.c -o dounzip.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/dstruct.c -o dstruct.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/duplicate.c -o duplicate.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/engine.c -o engine.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/envir.c -o envir.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/errors.c -o errors.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/eval.c -o eval.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/format.c -o format.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/fourier.c -o fourier.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/gevents.c -o gevents.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/gram.c -o gram.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/gram-ex.c -o gram-ex.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/gramRd.c -o gramRd.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/graphics.c -o graphics.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/identical.c -o identical.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/inspect.c -o inspect.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/inlined.c -o inlined.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/internet.c -o internet.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/iosupport.c -o iosupport.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/lapack.c -o lapack.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/list.c -o list.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/localecharset.c -o localecharset.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/logic.c -o logic.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/main.c -o main.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/mapply.c -o mapply.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/match.c -o match.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/memory.c -o memory.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/model.c -o model.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/names.c -o names.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/objects.c -o objects.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/optim.c -o optim.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/optimize.c -o optimize.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/options.c -o options.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/par.c -o par.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/paste.c -o paste.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/pcre.c -o pcre.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/platform.c -o platform.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/plot.c -o plot.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/plot3d.c -o plot3d.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/plotmath.c -o plotmath.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/print.c -o print.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/printarray.c -o printarray.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/printvector.c -o printvector.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/printutils.c -o printutils.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/qsort.c -o qsort.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/random.c -o random.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/regex.c -o regex.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/registration.c -o registration.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/relop.c -o relop.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/rlocale.c -o rlocale.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/saveload.c -o saveload.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/scan.c -o scan.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/seq.c -o seq.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/serialize.c -o serialize.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/size.c -o size.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/sort.c -o sort.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/source.c -o source.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/split.c -o split.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/sprintf.c -o sprintf.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/startup.c -o startup.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/subassign.c -o subassign.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/subscript.c -o subscript.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/subset.c -o subset.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/summary.c -o summary.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/sysutils.c -o sysutils.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/unique.c -o unique.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/util.c -o util.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/version.c -o version.o
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/vfonts.c -o vfonts.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../R-2.9-branch/src/main/xxxpr.f -o xxxpr.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -install_name libR.dylib -compatibility_version 2.9.0  -current_version 2.9.2  -headerpad_max_install_names -o libR.dylib CConverters.o CommandLineArgs.o Rdynload.o Renviron.o RNG.o apply.o apse.o arithmetic.o array.o attrib.o base.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cov.o cum.o dcf.o datetime.o debug.o deparse.o deriv.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o engine.o envir.o errors.o eval.o format.o fourier.o gevents.o gram.o gram-ex.o gramRd.o graphics.o identical.o inspect.o inlined.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o model.o names.o objects.o optim.o optimize.o options.o par.o paste.o pcre.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o random.o regex.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o size.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o unique.o util.o version.o vfonts.o xxxpr.o   ../unix/Rembedded.o ../unix/libunix.a ../appl/libappl.a ../nmath/libnmath.a  ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a ../extra/intl/libintl.a -L../../lib/i386 -lRblas -lgfortran    -Wl,-framework -Wl,CoreFoundation -lreadline  -lz -licucore -lm -liconv  
mkdir /Builds/R-builds/nightly/tiger-i386/R-2.9-branch/bin/exec
mkdir /Builds/R-builds/nightly/tiger-i386/R-2.9-branch/bin/exec/i386
gcc -arch i386 -std=gnu99  -I../../../../R-2.9-branch/src/extra/bzip2 -I../../../../R-2.9-branch/src/extra/pcre  -I. -I../../src/include -I../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../R-2.9-branch/src/main/Rmain.c -o Rmain.o
gcc -arch i386 -std=gnu99  -L/usr/local/lib -o R.bin Rmain.o -L../../lib/i386 -lR -lRblas
making nanoftp.d from ../../../../../R-2.9-branch/src/modules/internet/nanoftp.c
making Rsock.d from ../../../../../R-2.9-branch/src/modules/internet/Rsock.c
making nanohttp.d from ../../../../../R-2.9-branch/src/modules/internet/nanohttp.c
making internet.d from ../../../../../R-2.9-branch/src/modules/internet/internet.c
making sockconn.d from ../../../../../R-2.9-branch/src/modules/internet/sockconn.c
making sock.d from ../../../../../R-2.9-branch/src/modules/internet/sock.c
making Lapack.d from ../../../../../R-2.9-branch/src/modules/lapack/Lapack.c
making g_alab_her.d from ../../../../../R-2.9-branch/src/modules/vfonts/g_alab_her.c
making g_cntrlify.d from ../../../../../R-2.9-branch/src/modules/vfonts/g_cntrlify.c
making g_fontdb.d from ../../../../../R-2.9-branch/src/modules/vfonts/g_fontdb.c
making g_her_glyph.d from ../../../../../R-2.9-branch/src/modules/vfonts/g_her_glyph.c
making g_cntrlify.d from ../../../../../R-2.9-branch/src/modules/vfonts/g_cntrlify.c
making g_fontdb.d from ../../../../../R-2.9-branch/src/modules/vfonts/g_fontdb.c
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/modules/internet/Rsock.c -o Rsock.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/modules/internet/internet.c -o internet.o
gfortran -arch i386 -fPIC  -g -O2 -ffloat-store -c ../../../../../R-2.9-branch/src/modules/lapack/dlamch.f -o dlamch.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/modules/internet/nanoftp.c -o nanoftp.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../../R-2.9-branch/src/modules/lapack/dlapack0.f -o dlapack0.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../../R-2.9-branch/src/modules/lapack/dlapack1.f -o dlapack1.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/modules/internet/nanohttp.c -o nanohttp.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../../R-2.9-branch/src/modules/vfonts/g_alab_her.c -o g_alab_her.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/modules/internet/sock.c -o sock.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../../R-2.9-branch/src/modules/lapack/dlapack2.f -o dlapack2.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2  -c ../../../../../R-2.9-branch/src/modules/internet/sockconn.c -o sockconn.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../../R-2.9-branch/src/modules/vfonts/g_cntrlify.c -o g_cntrlify.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../../R-2.9-branch/src/modules/lapack/dlapack3.f -o dlapack3.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../../R-2.9-branch/src/modules/vfonts/g_fontdb.c -o g_fontdb.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../../R-2.9-branch/src/modules/lapack/dlapack4.f -o dlapack4.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o internet.so Rsock.o internet.o nanoftp.o nanohttp.o sock.o sockconn.o -L../../../lib/i386 -lR -dylib_file libRblas.dylib:../../../lib/i386/libRblas.dylib  -Wl,-framework -Wl,CoreFoundation
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../../R-2.9-branch/src/modules/vfonts/g_her_glyph.c -o g_her_glyph.o
gfortran -arch i386  -fPIC  -g -O2 -c ../../../../../R-2.9-branch/src/modules/lapack/cmplx.f -o cmplx.o
mkdir /Builds/R-builds/nightly/tiger-i386/R-2.9-branch/modules
mkdir /Builds/R-builds/nightly/tiger-i386/R-2.9-branch/modules/i386
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o vfonts.so g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o -L../../../lib/i386 -lR -dylib_file libRblas.dylib:../../../lib/i386/libRblas.dylib   -Wl,-framework -Wl,CoreFoundation
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o libRlapack.dylib dlamch.o dlapack0.o dlapack1.o dlapack2.o dlapack3.o dlapack4.o cmplx.o -install_name libRlapack.dylib -compatibility_version 2.9.0 -current_version 2.9.2  -headerpad_max_install_names -L../../../lib/i386 -lRblas -lgfortran -L../../../lib/i386 -lR -dylib_file libRblas.dylib:../../../lib/i386/libRblas.dylib
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../../R-2.9-branch/src/modules/lapack/Lapack.c -o Lapack.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o lapack.so  Lapack.o   -L../../../lib/i386 -lR -dylib_file libRblas.dylib:../../../lib/i386/libRblas.dylib  -Wl,-framework -Wl,CoreFoundation -L../../../lib/i386 -lRlapack -L../../../lib/i386 -lRblas -lgfortran
/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRlapack.dylib is unchanged
making devX11.d from ../../../../../R-2.9-branch/src/modules/X11/devX11.c
making dataentry.d from ../../../../../R-2.9-branch/src/modules/X11/dataentry.c
making rbitmap.d from ../../../../../R-2.9-branch/src/modules/X11/rbitmap.c
making rotated.d from ../../../../../R-2.9-branch/src/modules/X11/rotated.c
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include  -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include -I/usr/local/include/libpng12   -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../../R-2.9-branch/src/modules/X11/dataentry.c -o dataentry.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include  -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include -I/usr/local/include/libpng12   -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../../R-2.9-branch/src/modules/X11/devX11.c -o devX11.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include  -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include -I/usr/local/include/libpng12   -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../../R-2.9-branch/src/modules/X11/rotated.c -o rotated.o
gcc -arch i386 -std=gnu99 -I. -I../../../src/include -I../../../../../R-2.9-branch/src/include  -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include -I/usr/local/include/libpng12   -I/usr/local/include -DHAVE_CONFIG_H   -fPIC  -mtune=core2 -g -O2 -c ../../../../../R-2.9-branch/src/modules/X11/rbitmap.c -o rbitmap.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o R_X11.so dataentry.o devX11.o rotated.o rbitmap.o  -lSM -lICE -L/usr/local/lib -L/usr/X11R6/lib -lcairo -lfontconfig -lXrender -lSM -lICE -lX11 -lpixman-1 -lxml2 -liconv -lfreetype -lpng12 -lz   -L/usr/X11R6/lib -R/usr/X11R6/lib -lX11 -lXt -lXmu  -ljpeg -lpng -lz  -L../../../lib/i386 -lR -dylib_file libRblas.dylib:../../../lib/i386/libRblas.dylib   -Wl,-framework -Wl,CoreFoundation
mkdir ../../library
building system startup profile
mkdir ../../../library/base
mkdir ../../../library/base/R
building package 'base'
mkdir ../../../library/base/demo
mkdir ../../../library/base/man
mkdir ../../../library/base/po
building package 'tools'
mkdir ../../../library/tools
mkdir ../../../library/tools/R
mkdir ../../../library/tools/man
mkdir ../../../library/tools/po
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/tools/src/text.c -o text.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/tools/src/init.c -o init.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/tools/src/Rmd5.c -o Rmd5.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/tools/src/md5.c -o md5.o
making text.d from ../../../../../../R-2.9-branch/src/library/tools/src/text.c
making init.d from ../../../../../../R-2.9-branch/src/library/tools/src/init.c
making md5.d from ../../../../../../R-2.9-branch/src/library/tools/src/md5.c
making Rmd5.d from ../../../../../../R-2.9-branch/src/library/tools/src/Rmd5.c
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o tools.so text.o init.o Rmd5.o md5.o -L../../../../lib/i386 -lR -dylib_file libRblas.dylib:../../../../lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/tools/libs
mkdir ../../../../library/tools/libs/i386
building package 'utils'
mkdir ../../../library/utils
mkdir ../../../library/utils/R
mkdir ../../../library/utils/Sweave
mkdir ../../../library/utils/po
mkdir ../../../library/utils/man
mkdir ../../../library/utils/misc
building package 'grDevices'
mkdir ../../../library/grDevices
mkdir ../../../library/grDevices/R
mkdir ../../../library/grDevices/afm
mkdir ../../../library/grDevices/man
mkdir ../../../library/grDevices/po
mkdir ../../../library/grDevices/enc
making devPicTeX.d from ../../../../../../R-2.9-branch/src/library/grDevices/src/devPicTeX.c
making devNull.d from ../../../../../../R-2.9-branch/src/library/grDevices/src/devNull.c
making devPS.d from ../../../../../../R-2.9-branch/src/library/grDevices/src/devPS.c
making qdPDF.d from ../../../../../../R-2.9-branch/src/library/grDevices/src/qdPDF.c
making chull.d from ../../../../../../R-2.9-branch/src/library/grDevices/src/chull.c
making qdBitmap.d from ../../../../../../R-2.9-branch/src/library/grDevices/src/qdBitmap.c
making init.d from ../../../../../../R-2.9-branch/src/library/grDevices/src/init.c
making devQuartz.d from ../../../../../../R-2.9-branch/src/library/grDevices/src/devQuartz.c
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grDevices/src/chull.c -o chull.o
making qdCocoa.d from ../../../../../../R-2.9-branch/src/library/grDevices/src/qdCocoa.m
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grDevices/src/devNull.c -o devNull.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grDevices/src/devPicTeX.c -o devPicTeX.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grDevices/src/devPS.c -o devPS.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grDevices/src/devQuartz.c -o devQuartz.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grDevices/src/init.c -o init.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grDevices/src/qdBitmap.c -o qdBitmap.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grDevices/src/qdPDF.c -o qdPDF.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include   -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grDevices/src/qdCocoa.m -o qdCocoa.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o grDevices.so chull.o devNull.o devPicTeX.o devPS.o devQuartz.o init.o qdBitmap.o qdPDF.o qdCocoa.o -framework AppKit -L../../../../lib/i386 -lR -dylib_file libRblas.dylib:../../../../lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/grDevices/libs
mkdir ../../../../library/grDevices/libs/i386
building package 'graphics'
mkdir ../../../library/graphics
mkdir ../../../library/graphics/R
mkdir ../../../library/graphics/po
mkdir ../../../library/graphics/man
building package 'stats'
mkdir ../../../library/stats
mkdir ../../../library/stats/R
mkdir ../../../library/stats/po
mkdir ../../../library/stats/man
making kmeans.d from ../../../../../../R-2.9-branch/src/library/stats/src/kmeans.c
making init.d from ../../../../../../R-2.9-branch/src/library/stats/src/init.c
making ansari.d from ../../../../../../R-2.9-branch/src/library/stats/src/ansari.c
making bandwidths.d from ../../../../../../R-2.9-branch/src/library/stats/src/bandwidths.c
making fexact.d from ../../../../../../R-2.9-branch/src/library/stats/src/fexact.c
making d2x2xk.d from ../../../../../../R-2.9-branch/src/library/stats/src/d2x2xk.c
making chisqsim.d from ../../../../../../R-2.9-branch/src/library/stats/src/chisqsim.c
making kendall.d from ../../../../../../R-2.9-branch/src/library/stats/src/kendall.c
making ks.d from ../../../../../../R-2.9-branch/src/library/stats/src/ks.c
making line.d from ../../../../../../R-2.9-branch/src/library/stats/src/line.c
making smooth.d from ../../../../../../R-2.9-branch/src/library/stats/src/smooth.c
making ksmooth.d from ../../../../../../R-2.9-branch/src/library/stats/src/ksmooth.c
making prho.d from ../../../../../../R-2.9-branch/src/library/stats/src/prho.c
making swilk.d from ../../../../../../R-2.9-branch/src/library/stats/src/swilk.c
making loessc.d from ../../../../../../R-2.9-branch/src/library/stats/src/loessc.c
making isoreg.d from ../../../../../../R-2.9-branch/src/library/stats/src/isoreg.c
making Srunmed.d from ../../../../../../R-2.9-branch/src/library/stats/src/Srunmed.c
making dblcen.d from ../../../../../../R-2.9-branch/src/library/stats/src/dblcen.c
making Trunmed.d from ../../../../../../R-2.9-branch/src/library/stats/src/Trunmed.c
making distance.d from ../../../../../../R-2.9-branch/src/library/stats/src/distance.c
making nls.d from ../../../../../../R-2.9-branch/src/library/stats/src/nls.c
making HoltWinters.d from ../../../../../../R-2.9-branch/src/library/stats/src/HoltWinters.c
making PPsum.d from ../../../../../../R-2.9-branch/src/library/stats/src/PPsum.c
making hclust-utils.d from ../../../../../../R-2.9-branch/src/library/stats/src/hclust-utils.c
making arima.d from ../../../../../../R-2.9-branch/src/library/stats/src/arima.c
making burg.d from ../../../../../../R-2.9-branch/src/library/stats/src/burg.c
making filter.d from ../../../../../../R-2.9-branch/src/library/stats/src/filter.c
making mAR.d from ../../../../../../R-2.9-branch/src/library/stats/src/mAR.c
making pacf.d from ../../../../../../R-2.9-branch/src/library/stats/src/pacf.c
making port.d from ../../../../../../R-2.9-branch/src/library/stats/src/port.c
making starma.d from ../../../../../../R-2.9-branch/src/library/stats/src/starma.c
making family.d from ../../../../../../R-2.9-branch/src/library/stats/src/family.c
making sbart.d from ../../../../../../R-2.9-branch/src/library/stats/src/sbart.c
making approx.d from ../../../../../../R-2.9-branch/src/library/stats/src/approx.c
making loglin.d from ../../../../../../R-2.9-branch/src/library/stats/src/loglin.c
making lowess.d from ../../../../../../R-2.9-branch/src/library/stats/src/lowess.c
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/init.c -o init.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/kmeans.c -o kmeans.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/ansari.c -o ansari.o
making massdist.d from ../../../../../../R-2.9-branch/src/library/stats/src/massdist.c
making splines.d from ../../../../../../R-2.9-branch/src/library/stats/src/splines.c
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/bandwidths.c -o bandwidths.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/chisqsim.c -o chisqsim.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/d2x2xk.c -o d2x2xk.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/fexact.c -o fexact.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/kendall.c -o kendall.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/ks.c -o ks.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/line.c -o line.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/smooth.c -o smooth.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/prho.c -o prho.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/swilk.c -o swilk.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/ksmooth.c -o ksmooth.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/loessc.c -o loessc.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/isoreg.c -o isoreg.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/Srunmed.c -o Srunmed.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/Trunmed.c -o Trunmed.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/dblcen.c -o dblcen.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/distance.c -o distance.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/hclust-utils.c -o hclust-utils.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/nls.c -o nls.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/HoltWinters.c -o HoltWinters.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/PPsum.c -o PPsum.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/arima.c -o arima.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/burg.c -o burg.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/filter.c -o filter.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/mAR.c -o mAR.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/pacf.c -o pacf.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/starma.c -o starma.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/port.c -o port.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/family.c -o family.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/sbart.c -o sbart.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/approx.c -o approx.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/loglin.c -o loglin.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/lowess.c -o lowess.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/massdist.c -o massdist.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/splines.c -o splines.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/bsplvd.f -o bsplvd.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/bvalue.f -o bvalue.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/bvalus.f -o bvalus.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/loessf.f -o loessf.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/ppr.f -o ppr.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/qsbart.f -o qsbart.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/sgram.f -o sgram.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/sinerp.f -o sinerp.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/sslvrg.f -o sslvrg.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/stxwx.f -o stxwx.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/hclust.f -o hclust.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/kmns.f -o kmns.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/eureka.f -o eureka.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/stl.f -o stl.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/portsrc.f -o portsrc.o
gfortran -arch i386   -fPIC  -g -O2 -c ../../../../../../R-2.9-branch/src/library/stats/src/lminfl.f -o lminfl.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o isoreg.o Srunmed.o Trunmed.o dblcen.o distance.o hclust-utils.o nls.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -L../../../../lib/i386 -lRblas -lgfortran -L../../../../lib/i386 -lR -dylib_file libRblas.dylib:../../../../lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/stats/libs
mkdir ../../../../library/stats/libs/i386
building package 'datasets'
mkdir ../../../library/datasets
mkdir ../../../library/datasets/R
mkdir ../../../library/datasets/man
mkdir ../../../library/datasets/data
building package 'methods'
mkdir ../../../library/methods
mkdir ../../../library/methods/R
mkdir ../../../library/methods/po
mkdir ../../../library/methods/man
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/methods/src/do_substitute_direct.c -o do_substitute_direct.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/methods/src/init.c -o init.o
making init.d from ../../../../../../R-2.9-branch/src/library/methods/src/init.c
making do_substitute_direct.d from ../../../../../../R-2.9-branch/src/library/methods/src/do_substitute_direct.c
making class_support.d from ../../../../../../R-2.9-branch/src/library/methods/src/class_support.c
making slot.d from ../../../../../../R-2.9-branch/src/library/methods/src/slot.c
making tests.d from ../../../../../../R-2.9-branch/src/library/methods/src/tests.c
making methods_list_dispatch.d from ../../../../../../R-2.9-branch/src/library/methods/src/methods_list_dispatch.c
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/methods/src/methods_list_dispatch.c -o methods_list_dispatch.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/methods/src/slot.c -o slot.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/methods/src/class_support.c -o class_support.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I../../../include -I../../../../../../R-2.9-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/methods/src/tests.c -o tests.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o -L../../../../lib/i386 -lR -dylib_file libRblas.dylib:../../../../lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/methods/libs
mkdir ../../../../library/methods/libs/i386
dumping R code in package 'methods'
initializing class and method definitions ...done
building package 'grid'
mkdir ../../../library/grid
mkdir ../../../library/grid/R
mkdir ../../../library/grid/po
mkdir ../../../library/grid/man
mkdir ../../../library/grid/doc
making unit.d from ../../../../../../R-2.9-branch/src/library/grid/src/unit.c
making layout.d from ../../../../../../R-2.9-branch/src/library/grid/src/layout.c
making gpar.d from ../../../../../../R-2.9-branch/src/library/grid/src/gpar.c
making matrix.d from ../../../../../../R-2.9-branch/src/library/grid/src/matrix.c
making state.d from ../../../../../../R-2.9-branch/src/library/grid/src/state.c
making register.d from ../../../../../../R-2.9-branch/src/library/grid/src/register.c
making just.d from ../../../../../../R-2.9-branch/src/library/grid/src/just.c
making grid.d from ../../../../../../R-2.9-branch/src/library/grid/src/grid.c
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grid/src/gpar.c -o gpar.o
making util.d from ../../../../../../R-2.9-branch/src/library/grid/src/util.c
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grid/src/grid.c -o grid.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grid/src/just.c -o just.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grid/src/layout.c -o layout.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grid/src/matrix.c -o matrix.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grid/src/register.c -o register.o
making viewport.d from ../../../../../../R-2.9-branch/src/library/grid/src/viewport.c
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grid/src/state.c -o state.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grid/src/unit.c -o unit.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grid/src/util.c -o util.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/grid/src/viewport.c -o viewport.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o grid.so gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o -L../../../../lib/i386 -lR -dylib_file libRblas.dylib:../../../../lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/grid/libs
mkdir ../../../../library/grid/libs/i386
building package 'splines'
mkdir ../../../library/splines
mkdir ../../../library/splines/R
mkdir ../../../library/splines/po
mkdir ../../../library/splines/man
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/splines/src/splines.c -o splines.o
making splines.d from ../../../../../../R-2.9-branch/src/library/splines/src/splines.c
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o splines.so splines.o -L../../../../lib/i386 -lR -dylib_file libRblas.dylib:../../../../lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/splines/libs
mkdir ../../../../library/splines/libs/i386
building package 'stats4'
mkdir ../../../library/stats4
mkdir ../../../library/stats4/R
mkdir ../../../library/stats4/po
mkdir ../../../library/stats4/man

Creating a new generic function for "coef" in "stats4"
Creating a new generic function for "summary" in "stats4"
Creating a new generic function for "profile" in "stats4"
Creating a new generic function for "plot" in "stats4"
Creating a new generic function for "confint" in "stats4"
Creating a new generic function for "logLik" in "stats4"
Creating a new generic function for "vcov" in "stats4"
Creating a new generic function for "update" in "stats4"
building package 'tcltk'
mkdir ../../../library/tcltk
mkdir ../../../library/tcltk/R
mkdir ../../../library/tcltk/exec
mkdir ../../../library/tcltk/po
mkdir ../../../library/tcltk/man
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I/usr/local/include -I/usr/local/include  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/tcltk/src/init.c -o init.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I/usr/local/include -I/usr/local/include  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/tcltk/src/tcltk.c -o tcltk.o
gcc -arch i386 -std=gnu99 -I../../../../include -I../../../../include/i386 -I/usr/local/include -I/usr/local/include  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c ../../../../../../R-2.9-branch/src/library/tcltk/src/tcltk_unix.c -o tcltk_unix.o
making init.d from ../../../../../../R-2.9-branch/src/library/tcltk/src/init.c
making tcltk.d from ../../../../../../R-2.9-branch/src/library/tcltk/src/tcltk.c
making tcltk_unix.d from ../../../../../../R-2.9-branch/src/library/tcltk/src/tcltk_unix.c

In file included from ../../../../../../R-2.9-branch/src/library/tcltk/src/tcltk_unix.c:23:
../../../../include/R_ext/eventloop.h:73: warning: 'struct timeval' declared inside parameter list
../../../../include/R_ext/eventloop.h:73: warning: its scope is only this definition or declaration, which is probably not what you want
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/local/lib -ltcl8.5 -L/usr/local/lib -ltk8.5 -L/usr/X11R6/lib -lX11 -Wl,-weak-lXss -lXext -L../../../../lib/i386 -lR -dylib_file libRblas.dylib:../../../../lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[5]: `Makedeps' is up to date.
mkdir ../../../../library/tcltk/libs
mkdir ../../../../library/tcltk/libs/i386
installing parsed NAMESPACE files
make[1]: Nothing to be done for `R'.
installing translations:
mkdir ../share/locale
mkdir ../share/locale/en
mkdir ../share/locale/en/LC_MESSAGES
  en
mkdir ../share/locale/en_GB
mkdir ../share/locale/en_GB/LC_MESSAGES
  en_GB
mkdir ../share/locale/es
mkdir ../share/locale/es/LC_MESSAGES
  es
mkdir ../share/locale/fr
mkdir ../share/locale/fr/LC_MESSAGES
  fr
mkdir ../share/locale/de
mkdir ../share/locale/de/LC_MESSAGES
  de
mkdir ../share/locale/it
mkdir ../share/locale/it/LC_MESSAGES
  it
mkdir ../share/locale/ja
mkdir ../share/locale/ja/LC_MESSAGES
  ja
mkdir ../share/locale/ko
mkdir ../share/locale/ko/LC_MESSAGES
  ko
mkdir ../share/locale/pt_BR
mkdir ../share/locale/pt_BR/LC_MESSAGES
  pt_BR
mkdir ../share/locale/ru
mkdir ../share/locale/ru/LC_MESSAGES
  ru
mkdir ../share/locale/zh_CN
mkdir ../share/locale/zh_CN/LC_MESSAGES
  zh_CN
mkdir ../share/locale/zh_TW
mkdir ../share/locale/zh_TW/LC_MESSAGES
  zh_TW
mkdir ../share/locale/en@quot
mkdir ../share/locale/en@quot/LC_MESSAGES
  en@quot
you should 'make docs' now ...
creating doc/manual/version.texi
creating doc/manual/R-FAQ.html
creating doc/manual/R-ints.html
creating doc/manual/R-intro.html
creating doc/manual/R-data.html
creating doc/manual/R-admin.html
creating doc/manual/R-lang.html
creating doc/manual/R-exts.html
building/updating package metadata ...
building all R documentation indices
building all R object docs (text, HTML, LaTeX, examples)
 >>> Building/Updating help pages for package 'base'
     Formats: text html latex example 
  Arithmetic                        text    html    latex   example
  AsIs                              text    html    latex
  Bessel                            text    html    latex   example
  Colon                             text    html    latex   example
  Comparison                        text    html    latex   example
  Constants                         text    html    latex   example
  Control                           text    html    latex   example
  Cstack_info                       text    html    latex   example
  DateTimeClasses                   text    html    latex   example
  Dates                             text    html    latex   example
  Defunct                           text    html    latex
  Deprecated                        text    html    latex
  Encoding                          text    html    latex   example
  EnvVar                            text    html    latex
  Extract                           text    html    latex   example
  Extract.data.frame                text    html    latex   example
  Extract.factor                    text    html    latex   example
  Extremes                          text    html    latex   example
  Foreign                           text    html    latex
  Hyperbolic                        text    html    latex
  Internal                          text    html    latex
  InternalMethods                   text    html    latex
  Last.value                        text    html    latex   example
  Log                               text    html    latex   example
  Logic                             text    html    latex   example
  MathFun                           text    html    latex   example
  Memory-limits                     text    html    latex
  Memory                            text    html    latex   example
  NA                                text    html    latex   example
  NULL                              text    html    latex   example
  NumericConstants                  text    html    latex   example
  Ops.Date                          text    html    latex   example
  Paren                             text    html    latex   example
  Platform                          text    html    latex   example
  Primitive                         text    html    latex   example
  Quotes                            text    html    latex
  Random-user                       text    html    latex   example
  Random                            text    html    latex   example
  RdUtils                           text    html    latex
  Recall                            text    html    latex   example
  Reserved                          text    html    latex
  Rhome                             text    html    latex
  Round                             text    html    latex   example
  Special                           text    html    latex   example
  Startup                           text    html    latex   example
  Syntax                            text    html    latex
  Sys.getenv                        text    html    latex   example
  Sys.getpid                        text    html    latex   example
  Sys.glob                          text    html    latex   example
  Sys.info                          text    html    latex   example
  Sys.localeconv                    text    html    latex   example
  Sys.setenv                        text    html    latex   example
  Sys.sleep                         text    html    latex   example
  Sys.time                          text    html    latex   example
  Sys.which                         text    html    latex   example
  Trig                              text    html    latex
  UseMethod                         text    html    latex
  Version                           text    html    latex   example
  abbreviate                        text    html    latex   example
  agrep                             text    html    latex   example
  all                               text    html    latex   example
  all.equal                         text    html    latex   example
  allnames                          text    html    latex   example
  any                               text    html    latex   example
  aperm                             text    html    latex   example
  append                            text    html    latex   example
  apply                             text    html    latex   example
  args                              text    html    latex   example
  array                             text    html    latex   example
  as.POSIXlt                        text    html    latex   example
  as.data.frame                     text    html    latex
  as.environment                    text    html    latex   example
  as.function                       text    html    latex   example
  assign                            text    html    latex   example
  assignOps                         text    html    latex
  attach                            text    html    latex   example
  attr                              text    html    latex   example
  attributes                        text    html    latex   example
  autoload                          text    html    latex   example
  backsolve                         text    html    latex   example
  base-defunct                      text    html    latex
  base-deprecated                   text    html    latex
  base-internal                     text    html    latex
  base-package                      text    html    latex
  basename                          text    html    latex   example
  bindenv                           text    html    latex   example
  body                              text    html    latex   example
  bquote                            text    html    latex   example
  browser                           text    html    latex
  builtins                          text    html    latex
  by                                text    html    latex   example
  c                                 text    html    latex   example
  call                              text    html    latex   example
  callCC                            text    html    latex   example
  capabilities                      text    html    latex   example
  cat                               text    html    latex   example
  cbind                             text    html    latex   example
  char.expand                       text    html    latex   example
  character                         text    html    latex   example
  charmatch                         text    html    latex   example
  chartr                            text    html    latex   example
  chol                              text    html    latex   example
  chol2inv                          text    html    latex   example
  class                             text    html    latex   example
  col                               text    html    latex   example
  colSums                           text    html    latex   example
  colnames                          text    html    latex   example
  commandArgs                       text    html    latex   example
  comment                           text    html    latex   example
  complex                           text    html    latex   example
  conditions                        text    html    latex   example
  conflicts                         text    html    latex   example
  connections                       text    html    latex   example
  contributors                      text    html    latex
  converters                        text    html    latex   example
  copyright                         text    html    latex
  crossprod                         text    html    latex   example
  cumsum                            text    html    latex   example
  cut.POSIXt                        text    html    latex   example
  cut                               text    html    latex   example
  data.class                        text    html    latex   example
  data.frame                        text    html    latex   example
  data.matrix                       text    html    latex   example
  dataframeHelpers                  text    html    latex
  date                              text    html    latex   example
  dcf                               text    html    latex   example
  debug                             text    html    latex
  delayedAssign                     text    html    latex   example
  deparse                           text    html    latex   example
  deparseOpts                       text    html    latex
  det                               text    html    latex   example
  detach                            text    html    latex   example
  dev                               text    html    latex
  diag                              text    html    latex   example
  diff                              text    html    latex   example
  difftime                          text    html    latex   example
  dim                               text    html    latex   example
  dimnames                          text    html    latex   example
  do.call                           text    html    latex   example
  double                            text    html    latex   example
  dput                              text    html    latex   example
  drop                              text    html    latex   example
  dump                              text    html    latex   example
  duplicated                        text    html    latex   example
  dynload                           text    html    latex   example
  eapply                            text    html    latex   example
  eigen                             text    html    latex   example
  encodeString                      text    html    latex   example
  environment                       text    html    latex   example
  eval                              text    html    latex   example
  exists                            text    html    latex   example
  expand.grid                       text    html    latex   example
  expression                        text    html    latex   example
  factor                            text    html    latex   example
  file.access                       text    html    latex   example
  file.choose                       text    html    latex
  file.info                         text    html    latex   example
  file.path                         text    html    latex
  file.show                         text    html    latex   example
  files                             text    html    latex   example
  files2                            text    html    latex
  findInt                           text    html    latex   example
  force                             text    html    latex   example
  formals                           text    html    latex   example
  format.Date                       text    html    latex   example
  format                            text    html    latex   example
  format.info                       text    html    latex   example
  format.pval                       text    html    latex   example
  formatDL                          text    html    latex   example
  formatc                           text    html    latex   example
  function                          text    html    latex   example
  funprog                           text    html    latex   example
  gc                                text    html    latex   example
  gc.time                           text    html    latex   example
  gctorture                         text    html    latex
  get                               text    html    latex   example
  getCallingDLL                     text    html    latex   example
  getDLLRegisteredRoutines          text    html    latex   example
  getLoadedDLLs                     text    html    latex   example
  getNativeSymbolInfo               text    html    latex   example
  gettext                           text    html    latex   example
  getwd                             text    html    latex   example
  gl                                text    html    latex   example
  grep                              text    html    latex   example
  groupGeneric                      text    html    latex   example
  gzcon                             text    html    latex   example
  hexmode                           text    html    latex
  iconv                             text    html    latex   example
  icuSetCollate                     text    html    latex   example
  identical                         text    html    latex   example
  identity                          text    html    latex
  ifelse                            text    html    latex   example
  integer                           text    html    latex   example
  interaction                       text    html    latex   example
  interactive                       text    html    latex   example
  invisible                         text    html    latex   example
  is.finite                         text    html    latex   example
  is.function                       text    html    latex   example
  is.language                       text    html    latex   example
  is.object                         text    html    latex   example
  is.recursive                      text    html    latex   example
  is.single                         text    html    latex
  is.unsorted                       text    html    latex
  isR                               text    html    latex   example
  isS4                              text    html    latex   example
  isSymmetric                       text    html    latex   example
  jitter                            text    html    latex   example
  kappa                             text    html    latex   example
  kronecker                         text    html    latex   example
  l10n_info                         text    html    latex   example
  labels                            text    html    latex
  lapply                            text    html    latex   example
  lazyload                          text    html    latex
  length                            text    html    latex   example
  levels                            text    html    latex   example
  libPaths                          text    html    latex   example
  library                           text    html    latex   example
  library.dynam                     text    html    latex   example
  license                           text    html    latex
  list                              text    html    latex   example
  list.files                        text    html    latex   example
  load                              text    html    latex   example
  locales                           text    html    latex   example
  logical                           text    html    latex
  lower.tri                         text    html    latex   example
  ls                                text    html    latex   example
  make.names                        text    html    latex   example
  make.unique                       text    html    latex   example
  mapply                            text    html    latex   example
  margin.table                      text    html    latex   example
  mat.or.vec                        text    html    latex   example
  match                             text    html    latex   example
  match.arg                         text    html    latex   example
  match.call                        text    html    latex   example
  match.fun                         text    html    latex   example
  matmult                           text    html    latex   example
  matrix                            text    html    latex   example
  maxCol                            text    html    latex   example
  mean                              text    html    latex   example
  memory.profile                    text    html    latex   example
  merge                             text    html    latex   example
  message                           text    html    latex   example
  missing                           text    html    latex   example
  mode                              text    html    latex   example
  name                              text    html    latex   example
  names                             text    html    latex   example
  nargs                             text    html    latex   example
  nchar                             text    html    latex   example
  nlevels                           text    html    latex   example
  noquote                           text    html    latex   example
  notyet                            text    html    latex   example
  nrow                              text    html    latex   example
  ns-alt                            text    html    latex   example
  ns-dblcolon                       text    html    latex   example
  ns-hooks                          text    html    latex
  ns-internal                       text    html    latex
  ns-load                           text    html    latex
  ns-lowlev                         text    html    latex
  ns-reflect                        text    html    latex
  ns-topenv                         text    html    latex   example
  numeric                           text    html    latex   example
  numeric_version                   text    html    latex   example
  octmode                           text    html    latex   example
  on.exit                           text    html    latex   example
  options                           text    html    latex   example
  order                             text    html    latex   example
  outer                             text    html    latex   example
  parse                             text    html    latex   example
  paste                             text    html    latex   example
  path.expand                       text    html    latex   example
  pmatch                            text    html    latex   example
  polyroot                          text    html    latex   example
  pos.to.env                        text    html    latex   example
  pretty                            text    html    latex   example
  print                             text    html    latex   example
  print.dataframe                   text    html    latex   example
  print.default                     text    html    latex   example
  prmatrix                          text    html    latex   example
  proc.time                         text    html    latex   example
  prod                              text    html    latex   example
  prop.table                        text    html    latex   example
  pushBack                          text    html    latex   example
  qr                                text    html    latex   example
  qraux                             text    html    latex   example
  quit                              text    html    latex   example
  range                             text    html    latex   example
  rank                              text    html    latex   example
  rapply                            text    html    latex   example
  raw                               text    html    latex   example
  rawConnection                     text    html    latex   example
  rawConversion                     text    html    latex   example
  readBin                           text    html    latex   example
  readChar                          text    html    latex   example
  readLines                         text    html    latex   example
  readRDS                           text    html    latex
  readline                          text    html    latex   example
  real                              text    html    latex
  reg.finalizer                     text    html    latex   example
  regex                             text    html    latex
  rep                               text    html    latex   example
  replace                           text    html    latex
  rev                               text    html    latex   example
  rle                               text    html    latex   example
  rm                                text    html    latex   example
  round.POSIXt                      text    html    latex   example
  row                               text    html    latex   example
  row.names                         text    html    latex
  rowsum                            text    html    latex   example
  sQuote                            text    html    latex   example
  sample                            text    html    latex   example
  save                              text    html    latex   example
  scale                             text    html    latex   example
  scan                              text    html    latex   example
  search                            text    html    latex   example
  seek                              text    html    latex
  seq.Date                          text    html    latex   example
  seq.POSIXt                        text    html    latex   example
  seq                               text    html    latex   example
  sequence                          text    html    latex   example
  serialize                         text    html    latex   example
  setTimeLimit                      text    html    latex
  sets                              text    html    latex   example
  shQuote                           text    html    latex   example
  showConnections                   text    html    latex   example
  sign                              text    html    latex   example
  sink                              text    html    latex   example
  slice.index                       text    html    latex   example
  slotOp                            text    html    latex
  socketSelect                      text    html    latex   example
  solve                             text    html    latex   example
  sort                              text    html    latex   example
  source                            text    html    latex   example
  split                             text    html    latex   example
  sprintf                           text    html    latex   example
  srcfile                           text    html    latex   example
  standardGeneric                   text    html    latex
  stop                              text    html    latex   example
  stopifnot                         text    html    latex   example
  strptime                          text    html    latex   example
  strsplit                          text    html    latex   example
  strtrim                           text    html    latex   example
  structure                         text    html    latex   example
  strwrap                           text    html    latex   example
  subset                            text    html    latex   example
  substitute                        text    html    latex   example
  substr                            text    html    latex   example
  sum                               text    html    latex
  summary                           text    html    latex   example
  svd                               text    html    latex   example
  sweep                             text    html    latex   example
  switch                            text    html    latex   example
  sys.parent                        text    html    latex   example
  sys.source                        text    html    latex   example
  system                            text    html    latex   example
  system.file                       text    html    latex   example
  system.time                       text    html    latex   example
  t                                 text    html    latex   example
  table                             text    html    latex   example
  tabulate                          text    html    latex   example
  tapply                            text    html    latex   example
  taskCallback                      text    html    latex   example
  taskCallbackManager               text    html    latex   example
  taskCallbackNames                 text    html    latex   example
  tempfile                          text    html    latex   example
  textconnections                   text    html    latex   example
  tilde                             text    html    latex
  timezones                         text    html    latex   example
  toString                          text    html    latex   example
  trace                             text    html    latex   example
  traceback                         text    html    latex   example
  tracemem                          text    html    latex   example
  transform                         text    html    latex   example
  try                               text    html    latex   example
  typeof                            text    html    latex   example
  unique                            text    html    latex   example
  unlink                            text    html    latex
  unlist                            text    html    latex   example
  unname                            text    html    latex   example
  userhooks                         text    html    latex   example
  utf8Conversion                    text    html    latex   example
  vector                            text    html    latex   example
  warning                           text    html    latex   example
  warnings                          text    html    latex   example
  weekday.POSIXt                    text    html    latex   example
  which                             text    html    latex   example
  which.min                         text    html    latex   example
  with                              text    html    latex   example
  withVisible                       text    html    latex   example
  write                             text    html    latex   example
  writeLines                        text    html    latex
  xtfrm                             text    html    latex
  zMachine                          text    html    latex   example
  zScript                           text    html    latex
  zpackages                         text    html    latex   example
  zutils                            text    html    latex
  Signals                           text    html    latex
 >>> Building/Updating help pages for package 'tools'
     Formats: text html latex example 
  QC                                text    html    latex
  Rd2HTML                           text    html    latex   example
  Rdiff                             text    html    latex
  Rdindex                           text    html    latex
  Rdutils                           text    html    latex   example
  buildVignettes                    text    html    latex
  charsets                          text    html    latex   example
  checkFF                           text    html    latex   example
  checkMD5sums                      text    html    latex
  checkTnF                          text    html    latex
  checkVignettes                    text    html    latex
  codoc                             text    html    latex
  delimMatch                        text    html    latex   example
  dependsOnPkgs                     text    html    latex   example
  encoded                           text    html    latex   example
  fileutils                         text    html    latex   example
  getDepList                        text    html    latex   example
  installFoundDepends               text    html    latex   example
  makeLazyLoading                   text    html    latex   example
  md5sum                            text    html    latex   example
  package.dependencies              text    html    latex
  parse_Rd                          text    html    latex   example
  read.00Index                      text    html    latex
  readNEWS                          text    html    latex   example
  showNonASCII                      text    html    latex   example
  testInstalledPackage              text    html    latex
  texi2dvi                          text    html    latex
  tools-defunct                     text    html    latex
  tools-deprecated                  text    html    latex
  tools-package                     text    html    latex
  undoc                             text    html    latex   example
  vignetteDepends                   text    html    latex   example
  writePACKAGES                     text    html    latex   example
  xgettext                          text    html    latex   example
 >>> Building/Updating help pages for package 'utils'
     Formats: text html latex example 
  INSTALL                           text    html    latex
  PkgUtils                          text    html    latex
  REMOVE                            text    html    latex
  RShowDoc                          text    html    latex   example
  RSiteSearch                       text    html    latex   example
  Rprof                             text    html    latex   example
  Rprofmem                          text    html    latex   example
  Rscript                           text    html    latex   example
  Rtangle                           text    html    latex
  RweaveLatex                       text    html    latex
  SHLIB                             text    html    latex   example
  Sweave                            text    html    latex   example
  SweaveSyntConv                    text    html    latex   example
  SweaveUtils                       text    html    latex
  URLencode                         text    html    latex   example
  View                              text    html    latex
  alarm                             text    html    latex   example
  apropos                           text    html    latex   example
  browseEnv                         text    html    latex   example
  browseURL                         text    html    latex   example
  browseVignettes                   text    html    latex   example
  bug.report                        text    html    latex
  capture.output                    text    html    latex   example
  chooseCRANmirror                  text    html    latex
  citEntry                          text    html    latex   example
  citation                          text    html    latex   example
  close.socket                      text    html    latex
  combn                             text    html    latex   example
  compareVersion                    text    html    latex   example
  count.fields                      text    html    latex   example
  data                              text    html    latex   example
  dataentry                         text    html    latex   example
  debugger                          text    html    latex   example
  demo                              text    html    latex   example
  download.file                     text    html    latex
  edit                              text    html    latex   example
  edit.data.frame                   text    html    latex   example
  example                           text    html    latex   example
  file.edit                         text    html    latex   example
  filetest                          text    html    latex   example
  fix                               text    html    latex   example
  flush.console                     text    html    latex
  format                            text    html    latex   example
  getAnywhere                       text    html    latex   example
  getFromNamespace                  text    html    latex   example
  getS3method                       text    html    latex   example
  glob2rx                           text    html    latex   example
  head                              text    html    latex   example
  help                              text    html    latex   example
  help.request                      text    html    latex
  help.search                       text    html    latex   example
  help.start                        text    html    latex   example
  index.search                      text    html    latex
  installed.packages                text    html    latex   example
  localeToCharset                   text    html    latex   example
  ls_str                            text    html    latex   example
  make.socket                       text    html    latex   example
  menu                              text    html    latex   example
  methods                           text    html    latex   example
  mirrorAdmin                       text    html    latex
  modifyList                        text    html    latex   example
  normalizePath                     text    html    latex   example
  object.size                       text    html    latex   example
  package.skeleton                  text    html    latex   example
  packageDescription                text    html    latex   example
  packageStatus                     text    html    latex   example
  page                              text    html    latex   example
  person                            text    html    latex   example
  prompt                            text    html    latex   example
  promptData                        text    html    latex   example
  promptPackage                     text    html    latex   example
  rcompgen                          text    html    latex
  read.DIF                          text    html    latex   example
  read.fortran                      text    html    latex   example
  read.fwf                          text    html    latex   example
  read.socket                       text    html    latex   example
  read.table                        text    html    latex
  recover                           text    html    latex   example
  relist                            text    html    latex   example
  remove.packages                   text    html    latex
  roman                             text    html    latex   example
  rtags                             text    html    latex   example
  savehistory                       text    html    latex   example
  select.list                       text    html    latex   example
  sessionInfo                       text    html    latex   example
  setRepositories                   text    html    latex
  stack                             text    html    latex   example
  str                               text    html    latex   example
  summaryRprof                      text    html    latex   example
  toLatex                           text    html    latex
  txtProgressBar                    text    html    latex   example
  type.convert                      text    html    latex
  unzip                             text    html    latex
  update.packages                   text    html    latex   example
  url.show                          text    html    latex   example
  utils-defunct                     text    html    latex
  utils-deprecated                  text    html    latex
  utils-package                     text    html    latex
  vignette                          text    html    latex   example
  write.table                       text    html    latex   example
  zip.file.extract                  text    html    latex
  BATCH                             text    html    latex
  COMPILE                           text    html    latex
  LINK                              text    html    latex
  RHOME                             text    html    latex
  make.packages.html                text    html    latex   example
  memory.size                       text    html    latex
  nsl                               text    html    latex   example
 >>> Building/Updating help pages for package 'grDevices'
     Formats: text html latex example 
  Devices                           text    html    latex   example
  Hershey                           text    html    latex   example
  Japanese                          text    html    latex   example
  Type1Font                         text    html    latex   example
  as.graphicsAnnot                  text    html    latex
  boxplot.stats                     text    html    latex   example
  check.options                     text    html    latex   example
  chull                             text    html    latex   example
  cm                                text    html    latex   example
  col2rgb                           text    html    latex   example
  colorRamp                         text    html    latex   example
  colors                            text    html    latex   example
  contourLines                      text    html    latex   example
  convertColor                      text    html    latex   example
  densCols                          text    html    latex   example
  dev                               text    html    latex   example
  dev.interactive                   text    html    latex   example
  dev.size                          text    html    latex   example
  dev2                              text    html    latex   example
  dev2bitmap                        text    html    latex
  devAskNewPage                     text    html    latex
  embedFonts                        text    html    latex
  extendrange                       text    html    latex   example
  getGraphicsEvent                  text    html    latex   example
  grDevices-defunct                 text    html    latex
  grDevices-package                 text    html    latex
  gray                              text    html    latex   example
  gray.colors                       text    html    latex   example
  hcl                               text    html    latex   example
  hsv                               text    html    latex   example
  make.rgb                          text    html    latex   example
  n2mfrow                           text    html    latex   example
  nclass                            text    html    latex   example
  palette                           text    html    latex   example
  palettes                          text    html    latex   example
  pdf                               text    html    latex   example
  pdf.options                       text    html    latex   example
  pictex                            text    html    latex   example
  plotmath                          text    html    latex   example
  postscript                        text    html    latex   example
  postscriptFonts                   text    html    latex   example
  ps.options                        text    html    latex   example
  recordGraphics                    text    html    latex   example
  recordplot                        text    html    latex
  rgb                               text    html    latex   example
  rgb2hsv                           text    html    latex   example
  trans3d                           text    html    latex   example
  xfig                              text    html    latex
  xy.coords                         text    html    latex   example
  xyTable                           text    html    latex   example
  xyz.coords                        text    html    latex   example
  cairo                             text    html    latex
  png                               text    html    latex   example
  quartz                            text    html    latex   example
  quartzFonts                       text    html    latex   example
  savePlot                          text    html    latex
  x11                               text    html    latex   example
  x11Fonts                          text    html    latex   example
 >>> Building/Updating help pages for package 'graphics'
     Formats: text html latex example 
  abline                            text    html    latex   example
  arrows                            text    html    latex   example
  assocplot                         text    html    latex   example
  axTicks                           text    html    latex   example
  axis.POSIXct                      text    html    latex   example
  axis                              text    html    latex   example
  barplot                           text    html    latex   example
  box                               text    html    latex   example
  boxplot                           text    html    latex   example
  boxplot.matrix                    text    html    latex   example
  bxp                               text    html    latex   example
  cdplot                            text    html    latex   example
  clip                              text    html    latex   example
  contour                           text    html    latex   example
  convertXY                         text    html    latex   example
  coplot                            text    html    latex   example
  curve                             text    html    latex   example
  dotchart                          text    html    latex   example
  filled.contour                    text    html    latex   example
  fourfoldplot                      text    html    latex   example
  frame                             text    html    latex
  graphics-defunct                  text    html    latex
  graphics-package                  text    html    latex
  grid                              text    html    latex   example
  hist.POSIXt                       text    html    latex   example
  hist                              text    html    latex   example
  identify                          text    html    latex   example
  image                             text    html    latex   example
  layout                            text    html    latex   example
  legend                            text    html    latex   example
  lines                             text    html    latex   example
  locator                           text    html    latex
  matplot                           text    html    latex   example
  mosaicplot                        text    html    latex   example
  mtext                             text    html    latex   example
  pairs                             text    html    latex   example
  panel.smooth                      text    html    latex   example
  par                               text    html    latex   example
  persp                             text    html    latex   example
  pie                               text    html    latex   example
  plot                              text    html    latex   example
  plot.dataframe                    text    html    latex   example
  plot.design                       text    html    latex   example
  plot.table                        text    html    latex   example
  plot.window                       text    html    latex   example
  plot.xy                           text    html    latex   example
  plotdefault                       text    html    latex   example
  plotfactor                        text    html    latex   example
  plotformula                       text    html    latex   example
  plothistogram                     text    html    latex   example
  points                            text    html    latex   example
  polygon                           text    html    latex   example
  rect                              text    html    latex   example
  rug                               text    html    latex   example
  screen                            text    html    latex   example
  segments                          text    html    latex   example
  smoothscatter                     text    html    latex   example
  spineplot                         text    html    latex   example
  stars                             text    html    latex   example
  stem                              text    html    latex   example
  stripchart                        text    html    latex   example
  strwidth                          text    html    latex   example
  sunflowerplot                     text    html    latex   example
  symbols                           text    html    latex   example
  text                              text    html    latex   example
  title                             text    html    latex   example
  units                             text    html    latex   example
  xspline                           text    html    latex   example
  zAxis                             text    html    latex
 >>> Building/Updating help pages for package 'stats'
     Formats: text html latex example 
  AIC                               text    html    latex   example
  ARMAacf                           text    html    latex   example
  ARMAtoMA                          text    html    latex   example
  Beta                              text    html    latex   example
  Binomial                          text    html    latex   example
  Cauchy                            text    html    latex   example
  Chisquare                         text    html    latex   example
  Exponential                       text    html    latex   example
  Fdist                             text    html    latex   example
  GammaDist                         text    html    latex   example
  Geometric                         text    html    latex   example
  HoltWinters                       text    html    latex   example
  Hypergeometric                    text    html    latex   example
  IQR                               text    html    latex   example
  KalmanLike                        text    html    latex
  Logistic                          text    html    latex   example
  Lognormal                         text    html    latex   example
  Multinom                          text    html    latex   example
  NLSstAsymptotic                   text    html    latex   example
  NLSstClosestX                     text    html    latex   example
  NLSstLfAsymptote                  text    html    latex   example
  NLSstRtAsymptote                  text    html    latex   example
  NegBinomial                       text    html    latex   example
  Normal                            text    html    latex   example
  Poisson                           text    html    latex   example
  SSD                               text    html    latex   example
  SSasymp                           text    html    latex   example
  SSasympOff                        text    html    latex   example
  SSasympOrig                       text    html    latex   example
  SSbiexp                           text    html    latex   example
  SSfol                             text    html    latex   example
  SSfpl                             text    html    latex   example
  SSgompertz                        text    html    latex   example
  SSlogis                           text    html    latex   example
  SSmicmen                          text    html    latex   example
  SSweibull                         text    html    latex   example
  SignRank                          text    html    latex   example
  StructTS                          text    html    latex   example
  TDist                             text    html    latex   example
  Tukey                             text    html    latex   example
  TukeyHSD                          text    html    latex   example
  Uniform                           text    html    latex   example
  Weibull                           text    html    latex   example
  Wilcoxon                          text    html    latex   example
  acf                               text    html    latex   example
  acf2AR                            text    html    latex   example
  add1                              text    html    latex   example
  addmargins                        text    html    latex   example
  aggregate                         text    html    latex   example
  alias                             text    html    latex   example
  anova                             text    html    latex
  anova.glm                         text    html    latex   example
  anova.lm                          text    html    latex   example
  anova.mlm                         text    html    latex   example
  ansari.test                       text    html    latex   example
  aov                               text    html    latex   example
  approxfun                         text    html    latex   example
  ar                                text    html    latex   example
  ar.ols                            text    html    latex   example
  arima                             text    html    latex   example
  arima.sim                         text    html    latex   example
  arima0                            text    html    latex   example
  as.hclust                         text    html    latex   example
  asOneSidedFormula                 text    html    latex   example
  ave                               text    html    latex   example
  bandwidth                         text    html    latex   example
  bartlett.test                     text    html    latex   example
  binom.test                        text    html    latex   example
  biplot                            text    html    latex
  biplot.princomp                   text    html    latex   example
  birthday                          text    html    latex   example
  box.test                          text    html    latex   example
  cancor                            text    html    latex   example
  case.names                        text    html    latex   example
  checkMFClasses                    text    html    latex
  chisq.test                        text    html    latex   example
  clearNames                        text    html    latex   example
  cmdscale                          text    html    latex   example
  coef                              text    html    latex   example
  complete.cases                    text    html    latex   example
  confint                           text    html    latex   example
  constrOptim                       text    html    latex   example
  contrast                          text    html    latex   example
  contrasts                         text    html    latex   example
  convolve                          text    html    latex   example
  cophenetic                        text    html    latex   example
  cor                               text    html    latex   example
  cor.test                          text    html    latex   example
  cov.wt                            text    html    latex   example
  cpgram                            text    html    latex   example
  cutree                            text    html    latex   example
  decompose                         text    html    latex   example
  delete.response                   text    html    latex   example
  dendrapply                        text    html    latex   example
  dendrogram                        text    html    latex   example
  density                           text    html    latex   example
  deriv                             text    html    latex   example
  deviance                          text    html    latex
  df.residual                       text    html    latex
  diffinv                           text    html    latex   example
  dist                              text    html    latex   example
  dummy.coef                        text    html    latex   example
  ecdf                              text    html    latex   example
  eff.aovlist                       text    html    latex   example
  effects                           text    html    latex   example
  embed                             text    html    latex   example
  expand.model.frame                text    html    latex   example
  extractAIC                        text    html    latex   example
  factanal                          text    html    latex   example
  factor.scope                      text    html    latex   example
  family                            text    html    latex   example
  fft                               text    html    latex   example
  filter                            text    html    latex   example
  fisher.test                       text    html    latex   example
  fitted.values                     text    html    latex
  fivenum                           text    html    latex   example
  fligner.test                      text    html    latex   example
  formula                           text    html    latex   example
  formula.nls                       text    html    latex   example
  friedman.test                     text    html    latex   example
  ftable                            text    html    latex   example
  ftable.formula                    text    html    latex   example
  getInitial                        text    html    latex   example
  glm                               text    html    latex   example
  glm.control                       text    html    latex   example
  glm.summaries                     text    html    latex
  hclust                            text    html    latex   example
  heatmap                           text    html    latex   example
  identify.hclust                   text    html    latex   example
  influence.measures                text    html    latex   example
  integrate                         text    html    latex   example
  interaction.plot                  text    html    latex   example
  is.empty                          text    html    latex   example
  isoreg                            text    html    latex   example
  kernapply                         text    html    latex   example
  kernel                            text    html    latex   example
  kmeans                            text    html    latex   example
  kruskal.test                      text    html    latex   example
  ks.test                           text    html    latex   example
  ksmooth                           text    html    latex   example
  lag                               text    html    latex   example
  lag.plot                          text    html    latex   example
  line                              text    html    latex   example
  lm                                text    html    latex   example
  lm.influence                      text    html    latex   example
  lm.summaries                      text    html    latex   example
  lmfit                             text    html    latex   example
  loadings                          text    html    latex
  loess                             text    html    latex   example
  loess.control                     text    html    latex
  logLik                            text    html    latex   example
  loglin                            text    html    latex   example
  lowess                            text    html    latex   example
  ls.diag                           text    html    latex   example
  ls.print                          text    html    latex
  lsfit                             text    html    latex   example
  mad                               text    html    latex   example
  mahalanobis                       text    html    latex   example
  make.link                         text    html    latex   example
  makepredictcall                   text    html    latex   example
  manova                            text    html    latex
  mantelhaen.test                   text    html    latex   example
  mauchly.test                      text    html    latex   example
  mcnemar.test                      text    html    latex   example
  median                            text    html    latex   example
  medpolish                         text    html    latex   example
  model.extract                     text    html    latex   example
  model.frame                       text    html    latex   example
  model.matrix                      text    html    latex   example
  model.tables                      text    html    latex   example
  monthplot                         text    html    latex   example
  mood.test                         text    html    latex   example
  na.action                         text    html    latex   example
  na.contiguous                     text    html    latex   example
  na.fail                           text    html    latex   example
  nafns                             text    html    latex
  naprint                           text    html    latex
  nextn                             text    html    latex   example
  nlm                               text    html    latex   example
  nlminb                            text    html    latex   example
  nls                               text    html    latex   example
  nls.control                       text    html    latex   example
  numericDeriv                      text    html    latex   example
  offset                            text    html    latex
  oneway.test                       text    html    latex   example
  optim                             text    html    latex   example
  optimize                          text    html    latex   example
  order.dendrogram                  text    html    latex   example
  p.adjust                          text    html    latex   example
  pairwise.prop.test                text    html    latex   example
  pairwise.t.test                   text    html    latex   example
  pairwise.table                    text    html    latex
  pairwise.wilcox.test              text    html    latex   example
  plot.HoltWinters                  text    html    latex
  plot.acf                          text    html    latex   example
  plot.density                      text    html    latex
  plot.isoreg                       text    html    latex   example
  plot.lm                           text    html    latex   example
  plot.ppr                          text    html    latex   example
  plot.profile.nls                  text    html    latex   example
  plot.spec                         text    html    latex
  plot.stepfun                      text    html    latex   example
  plot.ts                           text    html    latex   example
  poisson.test                      text    html    latex   example
  poly                              text    html    latex   example
  power                             text    html    latex   example
  power.anova.test                  text    html    latex   example
  power.prop.test                   text    html    latex   example
  power.t.test                      text    html    latex   example
  pp.test                           text    html    latex   example
  ppoints                           text    html    latex   example
  ppr                               text    html    latex   example
  prcomp                            text    html    latex   example
  predict.HoltWinters               text    html    latex   example
  predict                           text    html    latex   example
  predict.arima                     text    html    latex   example
  predict.glm                       text    html    latex   example
  predict.lm                        text    html    latex   example
  predict.loess                     text    html    latex   example
  predict.nls                       text    html    latex   example
  predict.smooth.spline             text    html    latex   example
  preplot                           text    html    latex
  princomp                          text    html    latex   example
  print.power.htest                 text    html    latex
  print.ts                          text    html    latex   example
  printCoefmat                      text    html    latex   example
  profile                           text    html    latex
  profile.nls                       text    html    latex   example
  proj                              text    html    latex   example
  prop.test                         text    html    latex   example
  prop.trend.test                   text    html    latex   example
  qqnorm                            text    html    latex   example
  quade.test                        text    html    latex   example
  quantile                          text    html    latex   example
  r2dtable                          text    html    latex   example
  read.ftable                       text    html    latex   example
  rect.hclust                       text    html    latex   example
  relevel                           text    html    latex   example
  reorder.dendrogram                text    html    latex   example
  reorder.factor                    text    html    latex   example
  replications                      text    html    latex   example
  reshape                           text    html    latex   example
  residuals                         text    html    latex
  runmed                            text    html    latex   example
  scatter.smooth                    text    html    latex   example
  screeplot                         text    html    latex   example
  sd                                text    html    latex   example
  se.contrast                       text    html    latex   example
  selfStart                         text    html    latex   example
  setNames                          text    html    latex   example
  shapiro.test                      text    html    latex   example
  simulate                          text    html    latex   example
  smooth                            text    html    latex   example
  smooth.spline                     text    html    latex   example
  smoothEnds                        text    html    latex   example
  sortedXyData                      text    html    latex   example
  spec.ar                           text    html    latex   example
  spec.pgram                        text    html    latex   example
  spec.taper                        text    html    latex
  spectrum                          text    html    latex   example
  splinefun                         text    html    latex   example
  start                             text    html    latex
  stat.anova                        text    html    latex   example
  stats-defunct                     text    html    latex
  stats-deprecated                  text    html    latex
  stats-package                     text    html    latex
  step                              text    html    latex   example
  stepfun                           text    html    latex   example
  stl                               text    html    latex   example
  stlmethods                        text    html    latex
  summary.aov                       text    html    latex   example
  summary.glm                       text    html    latex   example
  summary.lm                        text    html    latex   example
  summary.manova                    text    html    latex   example
  summary.nls                       text    html    latex
  summary.princomp                  text    html    latex   example
  supsmu                            text    html    latex   example
  symnum                            text    html    latex   example
  t.test                            text    html    latex   example
  termplot                          text    html    latex   example
  terms                             text    html    latex
  terms.formula                     text    html    latex
  terms.object                      text    html    latex   example
  time                              text    html    latex   example
  toeplitz                          text    html    latex   example
  ts-defunct                        text    html    latex
  ts-methods                        text    html    latex
  ts                                text    html    latex   example
  ts.plot                           text    html    latex   example
  ts.union                          text    html    latex   example
  tsSmooth                          text    html    latex
  tsdiag                            text    html    latex   example
  tsp                               text    html    latex
  uniroot                           text    html    latex   example
  update                            text    html    latex   example
  update.formula                    text    html    latex   example
  var.test                          text    html    latex   example
  varimax                           text    html    latex   example
  vcov                              text    html    latex
  weighted.mean                     text    html    latex   example
  weighted.residuals                text    html    latex   example
  wilcox.test                       text    html    latex   example
  window                            text    html    latex   example
  xtabs                             text    html    latex   example
  zC                                text    html    latex   example
 >>> Building/Updating help pages for package 'datasets'
     Formats: text html latex example 
  AirPassengers                     text    html    latex   example
  BJsales                           text    html    latex
  BOD                               text    html    latex   example
  ChickWeight                       text    html    latex   example
  DNase                             text    html    latex   example
  EuStockMarkets                    text    html    latex
  Formaldehyde                      text    html    latex   example
  HairEyeColor                      text    html    latex   example
  Harman23.cor                      text    html    latex   example
  Harman74.cor                      text    html    latex   example
  Indometh                          text    html    latex   example
  InsectSprays                      text    html    latex   example
  JohnsonJohnson                    text    html    latex   example
  LakeHuron                         text    html    latex
  LifeCycleSavings                  text    html    latex   example
  Loblolly                          text    html    latex   example
  Nile                              text    html    latex   example
  Orange                            text    html    latex   example
  OrchardSprays                     text    html    latex   example
  PlantGrowth                       text    html    latex   example
  Puromycin                         text    html    latex   example
  Theoph                            text    html    latex   example
  Titanic                           text    html    latex   example
  ToothGrowth                       text    html    latex   example
  UCBAdmissions                     text    html    latex   example
  UKDriverDeaths                    text    html    latex   example
  UKLungDeaths                      text    html    latex   example
  UKgas                             text    html    latex   example
  USAccDeaths                       text    html    latex
  USArrests                         text    html    latex   example
  USJudgeRatings                    text    html    latex   example
  USPersonalExpenditure             text    html    latex   example
  VADeaths                          text    html    latex   example
  WWWusage                          text    html    latex   example
  WorldPhones                       text    html    latex   example
  ability.cov                       text    html    latex   example
  airmiles                          text    html    latex   example
  airquality                        text    html    latex   example
  anscombe                          text    html    latex   example
  attenu                            text    html    latex   example
  attitude                          text    html    latex   example
  austres                           text    html    latex
  beavers                           text    html    latex   example
  cars                              text    html    latex   example
  chickwts                          text    html    latex   example
  co2                               text    html    latex   example
  crimtab                           text    html    latex   example
  datasets-package                  text    html    latex
  discoveries                       text    html    latex   example
  esoph                             text    html    latex   example
  euro                              text    html    latex   example
  eurodist                          text    html    latex
  faithful                          text    html    latex   example
  freeny                            text    html    latex   example
  infert                            text    html    latex   example
  iris                              text    html    latex   example
  islands                           text    html    latex   example
  lh                                text    html    latex
  longley                           text    html    latex   example
  lynx                              text    html    latex
  morley                            text    html    latex   example
  mtcars                            text    html    latex   example
  nhtemp                            text    html    latex   example
  nottem                            text    html    latex   example
  occupationalStatus                text    html    latex   example
  precip                            text    html    latex   example
  presidents                        text    html    latex   example
  pressure                          text    html    latex   example
  quakes                            text    html    latex   example
  randu                             text    html    latex   example
  rivers                            text    html    latex
  rock                              text    html    latex
  sleep                             text    html    latex   example
  stackloss                         text    html    latex   example
  state                             text    html    latex
  sunspot.month                     text    html    latex   example
  sunspot.year                      text    html    latex
  sunspots                          text    html    latex   example
  swiss                             text    html    latex   example
  treering                          text    html    latex
  trees                             text    html    latex   example
  uspop                             text    html    latex   example
  volcano                           text    html    latex   example
  warpbreaks                        text    html    latex   example
  women                             text    html    latex   example
  zCO2                              text    html    latex   example
 >>> Building/Updating help pages for package 'methods'
     Formats: text html latex example 
  BasicClasses                      text    html    latex
  Classes                           text    html    latex
  Documentation                     text    html    latex
  EmptyMethodsList-class            text    html    latex
  EnvironmentClass                  text    html    latex
  GenericFunctions                  text    html    latex   example
  LanguageClasses                   text    html    latex
  LinearMethodsList-class           text    html    latex
  MethodDefinition-class            text    html    latex
  MethodSupport                     text    html    latex
  MethodWithNext-class              text    html    latex
  Methods                           text    html    latex   example
  MethodsList-class                 text    html    latex
  MethodsList                       text    html    latex
  NextMethod                        text    html    latex   example
  ObjectsWithPackage-class          text    html    latex
  RClassUtils                       text    html    latex   example
  RMethodUtils                      text    html    latex   example
  S3Part                            text    html    latex   example
  S4groupGeneric                    text    html    latex   example
  SClassExtension-class             text    html    latex
  Session                           text    html    latex
  StructureClasses                  text    html    latex   example
  TraceClasses                      text    html    latex
  as                                text    html    latex   example
  callGeneric                       text    html    latex   example
  canCoerce                         text    html    latex   example
  cbind2                            text    html    latex   example
  classRepresentation-class         text    html    latex
  classesToAM                       text    html    latex   example
  dotsMethods                       text    html    latex   example
  findClass                         text    html    latex
  findMethods                       text    html    latex   example
  fixPrevious                       text    html    latex
  genericFunction-class             text    html    latex
  getClass                          text    html    latex   example
  getMethod                         text    html    latex   example
  getPackageName                    text    html    latex   example
  hasArg                            text    html    latex   example
  implicitGeneric                   text    html    latex   example
  initialize-methods                text    html    latex
  is                                text    html    latex   example
  isSealedMethod                    text    html    latex   example
  languageEl                        text    html    latex
  method.skeleton                   text    html    latex   example
  methodUtilities                   text    html    latex
  methods-defunct                   text    html    latex
  methods-package                   text    html    latex
  new                               text    html    latex   example
  nonStructure-class                text    html    latex   example
  promptClass                       text    html    latex   example
  promptMethods                     text    html    latex
  representation                    text    html    latex   example
  selectSuperClasses                text    html    latex   example
  setClass                          text    html    latex   example
  setClassUnion                     text    html    latex   example
  setGeneric                        text    html    latex   example
  setMethod                         text    html    latex   example
  setOldClass                       text    html    latex   example
  setSClass                         text    html    latex
  show                              text    html    latex   example
  showMethods                       text    html    latex   example
  signature-class                   text    html    latex
  slot                              text    html    latex   example
  substituteDirect                  text    html    latex
  testInheritedMethods              text    html    latex   example
  validObject                       text    html    latex   example
  zBasicFunsList                    text    html    latex
 >>> Building/Updating help pages for package 'grid'
     Formats: text html latex example 
  Grid                              text    html    latex   example
  absolute.size                     text    html    latex
  arrow                             text    html    latex   example
  convertNative                     text    html    latex   example
  current.viewport                  text    html    latex   example
  dataViewport                      text    html    latex
  drawDetails                       text    html    latex
  editDetails                       text    html    latex
  gEdit                             text    html    latex   example
  gPath                             text    html    latex   example
  getNames                          text    html    latex   example
  gpar                              text    html    latex   example
  grid-internal                     text    html    latex
  grid-package                      text    html    latex
  grid.add                          text    html    latex
  grid.arrows                       text    html    latex   example
  grid.circle                       text    html    latex
  grid.clip                         text    html    latex   example
  grid.collection                   text    html    latex
  grid.convert                      text    html    latex   example
  grid.copy                         text    html    latex
  grid.curve                        text    html    latex   example
  grid.display.list                 text    html    latex
  grid.draw                         text    html    latex   example
  grid.edit                         text    html    latex   example
  grid.frame                        text    html    latex   example
  grid.get                          text    html    latex   example
  grid.grab                         text    html    latex   example
  grid.grill                        text    html    latex
  grid.grob                         text    html    latex
  grid.layout                       text    html    latex   example
  grid.lines                        text    html    latex   example
  grid.locator                      text    html    latex   example
  grid.ls                           text    html    latex   example
  grid.move.to                      text    html    latex   example
  grid.newpage                      text    html    latex
  grid.null                         text    html    latex   example
  grid.pack                         text    html    latex
  grid.place                        text    html    latex
  grid.plot.and.legend              text    html    latex   example
  grid.points                       text    html    latex
  grid.polygon                      text    html    latex   example
  grid.pretty                       text    html    latex
  grid.prompt                       text    html    latex
  grid.record                       text    html    latex   example
  grid.rect                         text    html    latex
  grid.refresh                      text    html    latex
  grid.remove                       text    html    latex
  grid.roundrect                    text    html    latex   example
  grid.segments                     text    html    latex
  grid.set                          text    html    latex
  grid.show.layout                  text    html    latex   example
  grid.show.viewport                text    html    latex   example
  grid.text                         text    html    latex   example
  grid.xaxis                        text    html    latex
  grid.xspline                      text    html    latex   example
  grid.yaxis                        text    html    latex
  grobName                          text    html    latex
  grobWidth                         text    html    latex
  grobX                             text    html    latex
  plotViewport                      text    html    latex
  pop.viewport                      text    html    latex
  push.viewport                     text    html    latex
  stringWidth                       text    html    latex
  unit                              text    html    latex   example
  unit.c                            text    html    latex
  unit.length                       text    html    latex   example
  unit.pmin                         text    html    latex   example
  unit.rep                          text    html    latex   example
  valid.just                        text    html    latex
  validDetails                      text    html    latex
  viewport                          text    html    latex   example
  viewports                         text    html    latex   example
  vpPath                            text    html    latex   example
  widthDetails                      text    html    latex
  xDetails                          text    html    latex
 >>> Building/Updating help pages for package 'splines'
     Formats: text html latex example 
  asVector                          text    html    latex   example
  backSpline                        text    html    latex   example
  bs                                text    html    latex   example
  interpSpline                      text    html    latex   example
  ns                                text    html    latex   example
  periodicSpline                    text    html    latex   example
  polySpline                        text    html    latex   example
  predict.bSpline                   text    html    latex   example
  predict.bs                        text    html    latex   example
  splineDesign                      text    html    latex   example
  splineKnots                       text    html    latex   example
  splineOrder                       text    html    latex   example
  splines-package                   text    html    latex
  xyVector                          text    html    latex   example
 >>> Building/Updating help pages for package 'stats4'
     Formats: text html latex example 
  AIC-methods                       text    html    latex
  BIC                               text    html    latex   example
  coef-methods                      text    html    latex
  confint-methods                   text    html    latex
  logLik-methods                    text    html    latex
  mle-class                         text    html    latex
  mle                               text    html    latex   example
  plot-methods                      text    html    latex
  profile-methods                   text    html    latex
  profile.mle-class                 text    html    latex
  show-methods                      text    html    latex
  stats4-package                    text    html    latex
  summary-methods                   text    html    latex
  summary.mle-class                 text    html    latex
  update-methods                    text    html    latex   example
  vcov-methods                      text    html    latex
 >>> Building/Updating help pages for package 'tcltk'
     Formats: text html latex example 
  TclInterface                      text    html    latex   example
  TkCommands                        text    html    latex   example
  TkWidgetcmds                      text    html    latex   example
  TkWidgets                         text    html    latex   example
  tclServiceMode                    text    html    latex   example
  tcltk-defunct                     text    html    latex
  tcltk-package                     text    html    latex
  tkProgressBar                     text    html    latex   example
  tkStartGUI                        text    html    latex
  tk_choose.dir                     text    html    latex   example
  tk_choose.files                   text    html    latex   example
  tk_messageBox                     text    html    latex
  tk_select.list                    text    html    latex
  tkpager                           text    html    latex
begin installing recommended package VR
begin installing recommended package cluster
begin installing recommended package foreign
begin installing recommended package lattice
begin installing recommended package boot
begin installing recommended package rpart
begin installing recommended package codetools
begin installing recommended package KernSmooth
* Installing *source* package 'codetools' ...
** R
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'codetools'
     Formats: text html latex example 
  checkUsage                        text    html    latex   example
  codetools                         text    html    latex
  findGlobals                       text    html    latex   example
  showTree                          text    html    latex   example
** building package indices ...
* DONE (codetools)
begin installing recommended package survival
* Installing *source* package 'KernSmooth' ...
** libs
** arch - i386
gfortran -arch i386   -fPIC  -g -O2 -c blkest.f -o blkest.o
gfortran -arch i386   -fPIC  -g -O2 -c cp.f -o cp.o
gfortran -arch i386   -fPIC  -g -O2 -c dgedi.f -o dgedi.o
gfortran -arch i386   -fPIC  -g -O2 -c dgefa.f -o dgefa.o
gfortran -arch i386   -fPIC  -g -O2 -c dgesl.f -o dgesl.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c init.c -o init.o
gfortran -arch i386   -fPIC  -g -O2 -c linbin.f -o linbin.o
gfortran -arch i386   -fPIC  -g -O2 -c linbin2D.f -o linbin2D.o
gfortran -arch i386   -fPIC  -g -O2 -c locpoly.f -o locpoly.o
gfortran -arch i386   -fPIC  -g -O2 -c rlbin.f -o rlbin.o
gfortran -arch i386   -fPIC  -g -O2 -c sdiag.f -o sdiag.o
gfortran -arch i386   -fPIC  -g -O2 -c sstdiag.f -o sstdiag.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lRblas -lgfortran -lgfortran -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'KernSmooth'
     Formats: text html latex example 
  bkde                              text    html    latex   example
  bkde2D                            text    html    latex   example
  bkfe                              text    html    latex   example
  dpih                              text    html    latex   example
  dpik                              text    html    latex   example
  dpill                             text    html    latex   example
  locpoly                           text    html    latex   example
** building package indices ...
* DONE (KernSmooth)
begin installing recommended package Matrix
* Installing *source* package 'rpart' ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c anova.c -o anova.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c anovapred.c -o anovapred.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c branch.c -o branch.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c bsplit.c -o bsplit.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c choose_surg.c -o choose_surg.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c fix_cp.c -o fix_cp.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c free_tree.c -o free_tree.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c gini.c -o gini.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c graycode.c -o graycode.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c init.c -o init.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c insert_split.c -o insert_split.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c make_cp_list.c -o make_cp_list.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c make_cp_table.c -o make_cp_table.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c mysort.c -o mysort.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c nodesplit.c -o nodesplit.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c partition.c -o partition.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c poisson.c -o poisson.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c pred_rpart.c -o pred_rpart.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c rpart.c -o rpart.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c rpart_callback.c -o rpart_callback.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c rpartexp2.c -o rpartexp2.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c rpcountup.c -o rpcountup.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c rpmatrix.c -o rpmatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c rundown.c -o rundown.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c rundown2.c -o rundown2.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c s_to_rp.c -o s_to_rp.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c s_xpred.c -o s_xpred.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c surrogate.c -o surrogate.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c usersplit.c -o usersplit.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c xval.c -o xval.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o rpart.so anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o rpart.o rpart_callback.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o s_to_rp.o s_xpred.o surrogate.o usersplit.o xval.o -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** data
**  moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'rpart'
     Formats: text html latex example 
  car.test.frame                    text    html    latex   example
  cu.summary                        text    html    latex   example
  kyphosis                          text    html    latex   example
  labels.rpart                      text    html    latex
  meanvar.rpart                     text    html    latex   example
  na.rpart                          text    html    latex
  path.rpart                        text    html    latex   example
  plot.rpart                        text    html    latex   example
  plotcp                            text    html    latex
  post.rpart                        text    html    latex   example
  predict.rpart                     text    html    latex   example
  print.rpart                       text    html    latex   example
  printcp                           text    html    latex   example
  prune.rpart                       text    html    latex   example
  residuals.rpart                   text    html    latex   example
  rpart-internal                    text    html    latex
  rpart                             text    html    latex   example
  rpart.control                     text    html    latex
  rpart.object                      text    html    latex
  rpconvert                         text    html    latex
  rsq.rpart                         text    html    latex   example
  snip.rpart                        text    html    latex   example
  solder                            text    html    latex   example
  summary.rpart                     text    html    latex   example
  text.rpart                        text    html    latex   example
  xpred.rpart                       text    html    latex   example
** building package indices ...
* DONE (rpart)
* Installing *source* package 'boot' ...
** R
** data
**  moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'boot'
     Formats: text html latex example 
  EEF.profile                       text    html    latex
  Imp.Estimates                     text    html    latex   example
  abc.ci                            text    html    latex   example
  acme                              text    html    latex
  aids                              text    html    latex
  aircondit                         text    html    latex
  amis                              text    html    latex
  aml                               text    html    latex
  beaver                            text    html    latex
  bigcity                           text    html    latex
  boot-practicals                   text    html    latex
  boot                              text    html    latex   example
  boot.array                        text    html    latex   example
  boot.ci                           text    html    latex   example
  brambles                          text    html    latex
  breslow                           text    html    latex
  calcium                           text    html    latex
  cane                              text    html    latex
  capability                        text    html    latex
  catsM                             text    html    latex
     missing link(s):  cats cats
  cav                               text    html    latex
  cd4                               text    html    latex
  cd4.nested                        text    html    latex
  censboot                          text    html    latex   example
     missing link(s):  coxph survfit
  channing                          text    html    latex
  claridge                          text    html    latex
  cloth                             text    html    latex
  co.transfer                       text    html    latex
  coal                              text    html    latex
  control                           text    html    latex   example
  corr                              text    html    latex
  cum3                              text    html    latex
  cv.glm                            text    html    latex   example
  darwin                            text    html    latex
  dogs                              text    html    latex
  downs.bc                          text    html    latex
  ducks                             text    html    latex
  empinf                            text    html    latex   example
  envelope                          text    html    latex   example
  exp.tilt                          text    html    latex   example
  fir                               text    html    latex
  freq.array                        text    html    latex
  frets                             text    html    latex
  glm.diag                          text    html    latex
  glm.diag.plots                    text    html    latex   example
  gravity                           text    html    latex
  hirose                            text    html    latex
  imp.weights                       text    html    latex
  inv.logit                         text    html    latex
  islay                             text    html    latex
  jack.after.boot                   text    html    latex   example
  k3.linear                         text    html    latex   example
  linear.approx                     text    html    latex   example
  lines.saddle.distn                text    html    latex   example
  logit                             text    html    latex
  manaus                            text    html    latex
  melanoma                          text    html    latex
  motor                             text    html    latex
     missing link(s):  mcycle mcycle
  neuro                             text    html    latex
  nitrofen                          text    html    latex
  nodal                             text    html    latex
  norm.ci                           text    html    latex   example
  nuclear                           text    html    latex
  paulsen                           text    html    latex
  plot.boot                         text    html    latex   example
  poisons                           text    html    latex
  polar                             text    html    latex
  print.boot                        text    html    latex
  print.bootci                      text    html    latex
  print.saddle.distn                text    html    latex
  print.simplex                     text    html    latex
  remission                         text    html    latex
  saddle                            text    html    latex   example
  saddle.distn                      text    html    latex   example
  saddle.distn.object               text    html    latex
  salinity                          text    html    latex
  simplex                           text    html    latex   example
  simplex.object                    text    html    latex
  smooth.f                          text    html    latex   example
  sunspot                           text    html    latex
  survival                          text    html    latex
  tau                               text    html    latex
  tilt.boot                         text    html    latex   example
  tsboot                            text    html    latex   example
  tuna                              text    html    latex
  urine                             text    html    latex
  var.linear                        text    html    latex   example
  wool                              text    html    latex
** building package indices ...
* DONE (boot)
* Installing *source* package 'cluster' ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c clara.c -o clara.o
gfortran -arch i386   -fPIC  -g -O2 -c daisy.f -o daisy.o
gfortran -arch i386   -fPIC  -g -O2 -c dysta.f -o dysta.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c fanny.c -o fanny.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c init.c -o init.o
gfortran -arch i386   -fPIC  -g -O2 -c meet.f -o meet.o
gfortran -arch i386   -fPIC  -g -O2 -c mona.f -o mona.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c pam.c -o pam.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c sildist.c -o sildist.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c spannel.c -o spannel.o
gfortran -arch i386   -fPIC  -g -O2 -c twins.f -o twins.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o cluster.so clara.o daisy.o dysta.o fanny.o init.o meet.o mona.o pam.o sildist.o spannel.o twins.o -lgfortran -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** data
**  moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'cluster'
     Formats: text html latex example 
  agnes                             text    html    latex   example
  agnes.object                      text    html    latex
  agriculture                       text    html    latex   example
  animals                           text    html    latex   example
  bannerplot                        text    html    latex   example
  chorSub                           text    html    latex   example
  clara                             text    html    latex   example
  clara.object                      text    html    latex
  clusplot                          text    html    latex
  clusplot.default                  text    html    latex   example
  clusplot.partition                text    html    latex   example
  cluster-internal                  text    html    latex
  coef.hclust                       text    html    latex   example
  daisy                             text    html    latex   example
  diana                             text    html    latex   example
  dissimilarity.object              text    html    latex
  ellipsoidhull                     text    html    latex   example
  fanny                             text    html    latex   example
  fanny.object                      text    html    latex
  flower                            text    html    latex   example
  lower.to.upper.tri.inds           text    html    latex   example
  mona                              text    html    latex   example
  mona.object                       text    html    latex
  pam                               text    html    latex   example
  pam.object                        text    html    latex   example
  partition.object                  text    html    latex
  plantTraits                       text    html    latex   example
  plot.agnes                        text    html    latex   example
  plot.diana                        text    html    latex   example
  plot.mona                         text    html    latex
  plot.partition                    text    html    latex   example
  pltree                            text    html    latex
  pltree.twins                      text    html    latex   example
  pluton                            text    html    latex   example
  predict.ellipsoid                 text    html    latex   example
  print.agnes                       text    html    latex
  print.clara                       text    html    latex
  print.diana                       text    html    latex
  print.dissimilarity               text    html    latex   example
  print.fanny                       text    html    latex
  print.mona                        text    html    latex
  print.pam                         text    html    latex
  ruspini                           text    html    latex   example
  silhouette                        text    html    latex   example
  sizeDiss                          text    html    latex   example
  summary.agnes                     text    html    latex   example
  summary.clara                     text    html    latex   example
  summary.diana                     text    html    latex
  summary.mona                      text    html    latex
  summary.pam                       text    html    latex
  twins.object                      text    html    latex
  volume.ellipsoid                  text    html    latex   example
  votes.repub                       text    html    latex
  xclara                            text    html    latex
** building package indices ...
* DONE (cluster)
* Installing *source* package 'foreign' ...
checking for gcc... gcc -arch i386 -std=gnu99
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc -arch i386 -std=gnu99 accepts -g... yes
checking for gcc -arch i386 -std=gnu99 option to accept ANSI C... none needed
checking whether gcc -arch i386 -std=gnu99 accepts -Wno-long-long... yes
checking how to run the C preprocessor... gcc -arch i386 -std=gnu99 -E
checking for egrep... grep -E
checking for ANSI C header files... rm: conftest.dSYM: is a directory
rm: conftest.dSYM: is a directory
yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking byteswap.h usability... no
checking byteswap.h presence... no
checking for byteswap.h... no
checking for double... yes
checking size of double... 8
checking for int... yes
checking size of int... 4
checking for long... yes
checking size of long... 4
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating src/swap_bytes.h
config.status: creating src/var.h
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c R_systat.c -o R_systat.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c Rdbfread.c -o Rdbfread.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c Rdbfwrite.c -o Rdbfwrite.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c SASxport.c -o SASxport.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c avl.c -o avl.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c dbfopen.c -o dbfopen.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c file-handle.c -o file-handle.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c format.c -o format.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c init.c -o init.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c minitab.c -o minitab.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c pfm-read.c -o pfm-read.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c sfm-read.c -o sfm-read.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c spss.c -o spss.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include   -Wno-long-long -fPIC  -g -O2 -Wall -pedantic -c stataread.c -o stataread.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o foreign.so R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'foreign'
     Formats: text html latex example 
  lookup.xport                      text    html    latex   example
  read.S                            text    html    latex   example
  read.arff                         text    html    latex
  read.dbf                          text    html    latex   example
  read.dta                          text    html    latex   example
  read.epiinfo                      text    html    latex   example
  read.mtp                          text    html    latex   example
  read.octave                       text    html    latex
  read.spss                         text    html    latex   example
  read.ssd                          text    html    latex   example
  read.systat                       text    html    latex   example
  read.xport                        text    html    latex   example
  write.arff                        text    html    latex   example
  write.dbf                         text    html    latex   example
  write.dta                         text    html    latex   example
  write.foreign                     text    html    latex   example
** building package indices ...
* DONE (foreign)
* Installing *source* package 'survival' ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c agexact.c -o agexact.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c agfit3.c -o agfit3.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c agfit5.c -o agfit5.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c agmart.c -o agmart.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c agmart2.c -o agmart2.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c agscore.c -o agscore.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c agsurv1.c -o agsurv1.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c agsurv2.c -o agsurv2.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c agsurv3.c -o agsurv3.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c chinv2.c -o chinv2.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c chinv3.c -o chinv3.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c cholesky2.c -o cholesky2.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c cholesky3.c -o cholesky3.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c chsolve2.c -o chsolve2.o
chsolve2.c:2:1: warning: "/*" within comment
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c chsolve3.c -o chsolve3.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c cox_Rcallback.c -o cox_Rcallback.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c coxdetail.c -o coxdetail.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c coxfit2.c -o coxfit2.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c coxfit5.c -o coxfit5.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c coxmart.c -o coxmart.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c coxph_wtest.c -o coxph_wtest.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c coxscho.c -o coxscho.o
coxscho.c:2:1: warning: "/*" within comment
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c coxscore.c -o coxscore.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dmatrix.c -o dmatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c doloop.c -o doloop.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c pyears1.c -o pyears1.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c pyears2.c -o pyears2.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c pyears3.c -o pyears3.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c pystep.c -o pystep.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c survConcordance.c -o survConcordance.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c survdiff2.c -o survdiff2.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c survfit4.c -o survfit4.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c survpenal.c -o survpenal.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c survreg6.c -o survreg6.o
survreg6.c: In function 'survreg6':
survreg6.c:63: warning: 'time2' may be used uninitialized in this function
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c survreg7.c -o survreg7.o
survreg7.c: In function 'survreg7':
survreg7.c:86: warning: 'time2' may be used uninitialized in this function
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c survregc1.c -o survregc1.o
survregc1.c: In function 'survregc1':
survregc1.c:74: warning: 'fgrp' may be used uninitialized in this function
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c survregc2.c -o survregc2.o
survregc2.c: In function 'survregc2':
survregc2.c:28: warning: 'fgrp' may be used uninitialized in this function
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o survival.so agexact.o agfit3.o agfit5.o agmart.o agmart2.o agscore.o agsurv1.o agsurv2.o agsurv3.o chinv2.o chinv3.o cholesky2.o cholesky3.o chsolve2.o chsolve3.o cox_Rcallback.o coxdetail.o coxfit2.o coxfit5.o coxmart.o coxph_wtest.o coxscho.o coxscore.o dmatrix.o doloop.o pyears1.o pyears2.o pyears3.o pystep.o survConcordance.o survdiff2.o survfit4.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** data
**  moving datasets to lazyload DB
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'survival'
     Formats: text html latex example 
  Surv                              text    html    latex   example
  aareg                             text    html    latex   example
  aml                               text    html    latex
  anova.coxph                       text    html    latex   example
  attrassign                        text    html    latex   example
  basehaz                           text    html    latex
  bladder                           text    html    latex
  cch                               text    html    latex   example
  cgd                               text    html    latex
  clogit                            text    html    latex   example
  cluster                           text    html    latex   example
  colon                             text    html    latex
  cox.zph                           text    html    latex   example
  coxph                             text    html    latex   example
  coxph.control                     text    html    latex
  coxph.detail                      text    html    latex   example
  coxph.object                      text    html    latex
  dsurvreg                          text    html    latex   example
  frailty                           text    html    latex   example
  heart                             text    html    latex
  is.ratetable                      text    html    latex   example
  kidney                            text    html    latex   example
  lines.survfit                     text    html    latex   example
  lung                              text    html    latex
  mgus                              text    html    latex
  model.frame.coxph                 text    html    latex
  model.matrix.coxph                text    html    latex   example
  nwtco                             text    html    latex   example
  ovarian                           text    html    latex
  pbc                               text    html    latex
  pbcseq                            text    html    latex
  plot.aareg                        text    html    latex
  plot.cox.zph                      text    html    latex   example
  plot.survfit                      text    html    latex   example
  predict.coxph                     text    html    latex   example
  predict.survreg                   text    html    latex   example
  print.aareg                       text    html    latex
  print.summary.coxph               text    html    latex
  print.summary.survfit             text    html    latex
  print.survfit                     text    html    latex
  pspline                           text    html    latex   example
  pyears                            text    html    latex   example
  ratetable                         text    html    latex   example
  rats                              text    html    latex
  residuals.coxph                   text    html    latex   example
  residuals.survreg                 text    html    latex   example
  ridge                             text    html    latex   example
  stanford2                         text    html    latex
  strata                            text    html    latex   example
  summary.aareg                     text    html    latex   example
  summary.coxph                     text    html    latex   example
  summary.survfit                   text    html    latex   example
  survConcordance                   text    html    latex   example
  survSplit                         text    html    latex   example
  survdiff                          text    html    latex   example
  survexp                           text    html    latex   example
  survexp.fit                       text    html    latex
  survexp.us                        text    html    latex   example
  survfit                           text    html    latex
  survfit.coxph                     text    html    latex   example
  survfit.formula                   text    html    latex   example
  survfit.object                    text    html    latex
  survival-internal                 text    html    latex
  survobrien                        text    html    latex   example
  survreg                           text    html    latex   example
  survreg.control                   text    html    latex
  survreg.distributions             text    html    latex   example
  survreg.object                    text    html    latex
  survregDtest                      text    html    latex   example
  tcut                              text    html    latex   example
  tobin                             text    html    latex   example
  untangle.specials                 text    html    latex   example
  veteran                           text    html    latex
** building package indices ...
* DONE (survival)
* Installing *source* package 'lattice' ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c init.c -o init.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c threeDplot.c -o threeDplot.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o lattice.so init.o threeDplot.o -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** data
**  moving datasets to lazyload DB
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'lattice'
     Formats: text html latex example 
  Lattice                           text    html    latex   example
  Rows                              text    html    latex
  axis.default                      text    html    latex   example
  banking                           text    html    latex   example
  barchart.table                    text    html    latex   example
  barley                            text    html    latex   example
  cloud                             text    html    latex   example
  draw.colorkey                     text    html    latex
  draw.key                          text    html    latex
  environmental                     text    html    latex   example
  ethanol                           text    html    latex   example
  histogram                         text    html    latex   example
  interaction                       text    html    latex   example
  lattice.options                   text    html    latex   example
  latticeParseFormula               text    html    latex
  level.colors                      text    html    latex   example
  levelplot                         text    html    latex   example
  llines                            text    html    latex
  lset                              text    html    latex
  make.groups                       text    html    latex   example
  melanoma                          text    html    latex   example
  oneway                            text    html    latex
  packet.panel.default              text    html    latex   example
  panel.axis                        text    html    latex
  panel.barchart                    text    html    latex
  panel.bwplot                      text    html    latex   example
  panel.cloud                       text    html    latex
  panel.densityplot                 text    html    latex
  panel.dotplot                     text    html    latex
  panel.functions                   text    html    latex
  panel.histogram                   text    html    latex
  panel.levelplot                   text    html    latex
  panel.number                      text    html    latex
  panel.pairs                       text    html    latex
  panel.parallel                    text    html    latex
  panel.qqmath                      text    html    latex
  panel.qqmathline                  text    html    latex
  panel.smoothScatter               text    html    latex   example
  panel.stripplot                   text    html    latex
  panel.superpose                   text    html    latex
  panel.violin                      text    html    latex   example
  panel.xyplot                      text    html    latex   example
  prepanel.default                  text    html    latex
  prepanel.functions                text    html    latex
  print.trellis                     text    html    latex   example
  qq                                text    html    latex   example
  qqmath                            text    html    latex   example
  rfs                               text    html    latex   example
  shingles                          text    html    latex   example
  simpleKey                         text    html    latex
  simpleTheme                       text    html    latex   example
  singer                            text    html    latex   example
  splom                             text    html    latex   example
  strip.default                     text    html    latex   example
  tmd                               text    html    latex   example
  trellis.device                    text    html    latex
  trellis.object                    text    html    latex
  trellis.par.get                   text    html    latex   example
  update.trellis                    text    html    latex   example
  utilities.3d                      text    html    latex
  xyplot                            text    html    latex   example
** building package indices ...
* DONE (lattice)
begin installing recommended package nlme
* Installing *source* package 'MASS' ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c MASS.c -o MASS.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c lqs.c -o lqs.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o MASS.so MASS.o lqs.o -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** data
**  moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'MASS'
     Formats: text html latex example 
  Aids2                             text    html    latex
  Animals                           text    html    latex
  Boston                            text    html    latex
  Cars93                            text    html    latex
  Cushings                          text    html    latex
  DDT                               text    html    latex
  GAGurine                          text    html    latex
  Insurance                         text    html    latex   example
  MASS-internal                     text    html    latex
  Melanoma                          text    html    latex
  Null                              text    html    latex   example
  OME                               text    html    latex   example
  Pima.tr                           text    html    latex
  Rabbit                            text    html    latex
  Rubber                            text    html    latex
  SP500                             text    html    latex
  Sitka                             text    html    latex
  Sitka89                           text    html    latex
  Skye                              text    html    latex   example
  Traffic                           text    html    latex
  UScereal                          text    html    latex
  UScrime                           text    html    latex
  VA                                text    html    latex
  abbey                             text    html    latex
  accdeaths                         text    html    latex
  addterm                           text    html    latex   example
  anorexia                          text    html    latex
  anova.negbin                      text    html    latex   example
  area                              text    html    latex   example
  bacteria                          text    html    latex   example
  bandwidth.nrd                     text    html    latex   example
  bcv                               text    html    latex   example
  beav1                             text    html    latex   example
  beav2                             text    html    latex   example
  biopsy                            text    html    latex
  birthwt                           text    html    latex   example
  boxcox                            text    html    latex   example
  cabbages                          text    html    latex
  caith                             text    html    latex   example
  cats                              text    html    latex
  cement                            text    html    latex   example
  chem                              text    html    latex
  con2tr                            text    html    latex
  confint                           text    html    latex   example
  contr.sdif                        text    html    latex   example
  coop                              text    html    latex
  corresp                           text    html    latex   example
  cov.rob                           text    html    latex   example
  cov.trob                          text    html    latex   example
  cpus                              text    html    latex
  crabs                             text    html    latex
  deaths                            text    html    latex
  denumerate                        text    html    latex   example
  dose.p                            text    html    latex   example
  drivers                           text    html    latex
  dropterm                          text    html    latex   example
  eagles                            text    html    latex   example
  epil                              text    html    latex   example
  eqscplot                          text    html    latex
  farms                             text    html    latex   example
  fgl                               text    html    latex
  fitdistr                          text    html    latex   example
  forbes                            text    html    latex
  fractions                         text    html    latex   example
  galaxies                          text    html    latex   example
  gamma.dispersion                  text    html    latex
  gamma.shape.glm                   text    html    latex   example
  gehan                             text    html    latex   example
  genotype                          text    html    latex
  geyser                            text    html    latex
  gilgais                           text    html    latex
  ginv                              text    html    latex   example
  glm.convert                       text    html    latex   example
  glm.nb                            text    html    latex   example
  glmmPQL                           text    html    latex   example
  hills                             text    html    latex
  hist.scott                        text    html    latex
  housing                           text    html    latex   example
  huber                             text    html    latex   example
  hubers                            text    html    latex   example
  immer                             text    html    latex   example
  isoMDS                            text    html    latex   example
  kde2d                             text    html    latex   example
  lda                               text    html    latex   example
  ldahist                           text    html    latex
  leuk                              text    html    latex   example
  lm.gls                            text    html    latex
  lm.ridge                          text    html    latex   example
  loglm                             text    html    latex   example
  loglm1                            text    html    latex
  logtrans                          text    html    latex   example
  lqs                               text    html    latex   example
  mammals                           text    html    latex
  mca                               text    html    latex   example
  mcycle                            text    html    latex
  menarche                          text    html    latex   example
  michelson                         text    html    latex
  minn38                            text    html    latex
  motors                            text    html    latex   example
  muscle                            text    html    latex   example
  mvrnorm                           text    html    latex   example
  negative.binomial                 text    html    latex   example
  newcomb                           text    html    latex
  nlschools                         text    html    latex   example
  npk                               text    html    latex   example
  npr1                              text    html    latex
  oats                              text    html    latex   example
  painters                          text    html    latex
  pairs.lda                         text    html    latex
  parcoord                          text    html    latex   example
  petrol                            text    html    latex   example
  phones                            text    html    latex
  plot.lda                          text    html    latex
  plot.mca                          text    html    latex   example
  plot.profile                      text    html    latex   example
  polr                              text    html    latex   example
  predict.glmmPQL                   text    html    latex   example
  predict.lda                       text    html    latex   example
  predict.lqs                       text    html    latex   example
  predict.mca                       text    html    latex
  predict.qda                       text    html    latex   example
  profile.glm                       text    html    latex   example
  qda                               text    html    latex   example
  quine                             text    html    latex
  rational                          text    html    latex   example
  renumerate                        text    html    latex   example
  rlm                               text    html    latex   example
  rms.curv                          text    html    latex   example
  rnegbin                           text    html    latex   example
  road                              text    html    latex
  rotifer                           text    html    latex
  sammon                            text    html    latex   example
  ships                             text    html    latex
  shoes                             text    html    latex
  shrimp                            text    html    latex
  shuttle                           text    html    latex
  snails                            text    html    latex
  stdres                            text    html    latex
  steam                             text    html    latex
  stepAIC                           text    html    latex   example
  stormer                           text    html    latex
  studres                           text    html    latex
  summary.loglm                     text    html    latex
  summary.negbin                    text    html    latex   example
  summary.rlm                       text    html    latex   example
  survey                            text    html    latex
  synth.tr                          text    html    latex
  theta.md                          text    html    latex   example
  topo                              text    html    latex
  truehist                          text    html    latex
  ucv                               text    html    latex   example
  waders                            text    html    latex   example
  whiteside                         text    html    latex   example
  width.SJ                          text    html    latex   example
  write.matrix                      text    html    latex
  wtloss                            text    html    latex   example
** building package indices ...
* DONE (MASS)

* Installing *source* package 'class' ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c class.c -o class.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o class.so class.o -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'class'
     Formats: text html latex example 
  SOM                               text    html    latex   example
  batchSOM                          text    html    latex   example
  condense                          text    html    latex   example
  knn                               text    html    latex   example
  knn.cv                            text    html    latex   example
  knn1                              text    html    latex   example
  lvq1                              text    html    latex   example
  lvq2                              text    html    latex   example
  lvq3                              text    html    latex   example
  lvqinit                           text    html    latex   example
  lvqtest                           text    html    latex   example
  multiedit                         text    html    latex   example
  olvq1                             text    html    latex   example
  reduce.nn                         text    html    latex   example
  somgrid                           text    html    latex
** building package indices ...
* DONE (class)

* Installing *source* package 'nnet' ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c nnet.c -o nnet.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o nnet.so nnet.o -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'nnet'
     Formats: text html latex example 
  class.ind                         text    html    latex   example
  multinom                          text    html    latex   example
  nnet.Hess                         text    html    latex   example
  nnet                              text    html    latex   example
  predict.nnet                      text    html    latex   example
  which.is.max                      text    html    latex   example
** building package indices ...
* DONE (nnet)

* Installing *source* package 'spatial' ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c init.c -o init.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c krc.c -o krc.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c pps.c -o pps.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o spatial.so init.o krc.o pps.o -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'spatial'
     Formats: text html latex example 
  Kaver                             text    html    latex   example
  Kenvl                             text    html    latex   example
  Kfn                               text    html    latex   example
  Psim                              text    html    latex   example
  SSI                               text    html    latex   example
  Strauss                           text    html    latex   example
  anova.trls                        text    html    latex   example
  correlogram                       text    html    latex   example
  expcov                            text    html    latex   example
  ppgetregion                       text    html    latex
  ppinit                            text    html    latex   example
  pplik                             text    html    latex   example
  ppregion                          text    html    latex
  predict.trls                      text    html    latex   example
  prmat                             text    html    latex   example
  semat                             text    html    latex   example
  surf.gls                          text    html    latex   example
  surf.ls                           text    html    latex   example
  trls.influence                    text    html    latex   example
  trmat                             text    html    latex   example
  variogram                         text    html    latex   example
** building package indices ...
* DONE (spatial)
* DONE (VR)
* Installing *source* package 'nlme' ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c corStruct.c -o corStruct.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c gnls.c -o gnls.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c init.c -o init.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c matrix.c -o matrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c nlOptimizer.c -o nlOptimizer.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c nlme.c -o nlme.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c nlmefit.c -o nlmefit.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c nls.c -o nls.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c pdMat.c -o pdMat.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o nlme.so corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o nls.o pdMat.o -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** data
**  moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'nlme'
     Formats: text html latex example 
  ACF                               text    html    latex   example
  ACF.gls                           text    html    latex   example
  ACF.lme                           text    html    latex   example
  Alfalfa                           text    html    latex
  Assay                             text    html    latex
  BIC                               text    html    latex   example
  BIC.logLik                        text    html    latex   example
  BodyWeight                        text    html    latex
  Cefamandole                       text    html    latex   example
  Coef                              text    html    latex   example
  Covariate                         text    html    latex   example
  Covariate.varFunc                 text    html    latex   example
  Dialyzer                          text    html    latex
  Dim                               text    html    latex   example
  Dim.corSpatial                    text    html    latex   example
  Dim.corStruct                     text    html    latex   example
  Dim.pdMat                         text    html    latex   example
  Earthquake                        text    html    latex
  Extract.pdMat                     text    html    latex   example
  Fatigue                           text    html    latex
  Gasoline                          text    html    latex
  Glucose                           text    html    latex
  Glucose2                          text    html    latex
  Gun                               text    html    latex
  IGF                               text    html    latex
  Initialize                        text    html    latex   example
  Initialize.corStruct              text    html    latex   example
  Initialize.glsStruct              text    html    latex
  Initialize.lmeStruct              text    html    latex
  Initialize.reStruct               text    html    latex
  Initialize.varFunc                text    html    latex   example
  LDEsysMat                         text    html    latex   example
  Machines                          text    html    latex
  MathAchSchool                     text    html    latex
  MathAchieve                       text    html    latex   example
  Matrix                            text    html    latex   example
  Matrix.pdMat                      text    html    latex   example
  Matrix.reStruct                   text    html    latex   example
  Meat                              text    html    latex
  Milk                              text    html    latex
  Muscle                            text    html    latex
  Names                             text    html    latex   example
  Names.formula                     text    html    latex   example
  Names.pdBlocked                   text    html    latex   example
  Names.pdMat                       text    html    latex   example
  Names.reStruct                    text    html    latex   example
  Nitrendipene                      text    html    latex
  Oats                              text    html    latex
  Orthodont                         text    html    latex   example
  Ovary                             text    html    latex
  Oxboys                            text    html    latex
  Oxide                             text    html    latex
  PBG                               text    html    latex
  Phenobarb                         text    html    latex
  Pixel                             text    html    latex   example
  Quinidine                         text    html    latex
  Rail                              text    html    latex
  RatPupWeight                      text    html    latex
  Relaxin                           text    html    latex
  Remifentanil                      text    html    latex
  Soybean                           text    html    latex   example
  Spruce                            text    html    latex
  Tetracycline1                     text    html    latex
  Tetracycline2                     text    html    latex
  VarCorr                           text    html    latex   example
  Variogram                         text    html    latex   example
  Variogram.corExp                  text    html    latex   example
  Variogram.corGaus                 text    html    latex   example
  Variogram.corLin                  text    html    latex   example
  Variogram.corRatio                text    html    latex   example
  Variogram.corSpatial              text    html    latex   example
  Variogram.corSpher                text    html    latex   example
  Variogram.default                 text    html    latex   example
  Variogram.gls                     text    html    latex   example
  Variogram.lme                     text    html    latex   example
  Wafer                             text    html    latex
  Wheat                             text    html    latex
  Wheat2                            text    html    latex
  allCoef                           text    html    latex   example
  anova.gls                         text    html    latex   example
  anova.lme                         text    html    latex   example
  as.matrix.corStruct               text    html    latex   example
  as.matrix.pdMat                   text    html    latex   example
  as.matrix.reStruct                text    html    latex   example
  asOneFormula                      text    html    latex   example
  asTable                           text    html    latex   example
  augPred                           text    html    latex   example
  balancedGrouped                   text    html    latex   example
  bdf                               text    html    latex   example
  coef.corStruct                    text    html    latex   example
  coef.gnls                         text    html    latex   example
  coef.lmList                       text    html    latex   example
  coef.lme                          text    html    latex   example
  coef.modelStruct                  text    html    latex   example
  coef.pdMat                        text    html    latex   example
  coef.reStruct                     text    html    latex   example
  coef.varFunc                      text    html    latex   example
  collapse                          text    html    latex   example
  collapse.groupedData              text    html    latex   example
  compareFits                       text    html    latex   example
  comparePred                       text    html    latex   example
  corAR1                            text    html    latex   example
  corARMA                           text    html    latex   example
  corCAR1                           text    html    latex   example
  corClasses                        text    html    latex
  corCompSymm                       text    html    latex   example
  corExp                            text    html    latex   example
  corFactor                         text    html    latex   example
  corFactor.corStruct               text    html    latex   example
  corGaus                           text    html    latex   example
  corLin                            text    html    latex   example
  corMatrix                         text    html    latex   example
  corMatrix.corStruct               text    html    latex   example
  corMatrix.pdMat                   text    html    latex   example
  corMatrix.reStruct                text    html    latex   example
  corNatural                        text    html    latex   example
  corRatio                          text    html    latex   example
  corSpatial                        text    html    latex   example
  corSpher                          text    html    latex   example
  corSymm                           text    html    latex   example
  ergoStool                         text    html    latex   example
  fdHess                            text    html    latex   example
  fitted.glsStruct                  text    html    latex
  fitted.gnlsStruct                 text    html    latex
  fitted.lmList                     text    html    latex   example
  fitted.lme                        text    html    latex   example
  fitted.lmeStruct                  text    html    latex
  fitted.nlmeStruct                 text    html    latex
  fixed.effects                     text    html    latex   example
  fixef.lmList                      text    html    latex   example
  formula.pdBlocked                 text    html    latex   example
  formula.pdMat                     text    html    latex   example
  formula.reStruct                  text    html    latex   example
  gapply                            text    html    latex   example
  getCovariate                      text    html    latex   example
  getCovariate.corStruct            text    html    latex   example
  getCovariate.data.frame           text    html    latex   example
  getCovariate.varFunc              text    html    latex   example
  getCovariateFormula               text    html    latex   example
  getData                           text    html    latex   example
  getData.gls                       text    html    latex   example
  getData.lmList                    text    html    latex   example
  getData.lme                       text    html    latex   example
  getGroups                         text    html    latex   example
  getGroups.corStruct               text    html    latex   example
  getGroups.data.frame              text    html    latex   example
  getGroups.gls                     text    html    latex   example
  getGroups.lmList                  text    html    latex   example
  getGroups.lme                     text    html    latex   example
  getGroups.varFunc                 text    html    latex   example
  getGroupsFormula                  text    html    latex   example
  getResponse                       text    html    latex   example
  getResponseFormula                text    html    latex   example
  getVarCov                         text    html    latex   example
  gls                               text    html    latex   example
  glsControl                        text    html    latex   example
  glsObject                         text    html    latex
  glsStruct                         text    html    latex   example
  gnls                              text    html    latex   example
  gnlsControl                       text    html    latex   example
  gnlsObject                        text    html    latex
  gnlsStruct                        text    html    latex   example
  groupedData                       text    html    latex   example
  gsummary                          text    html    latex   example
  intervals                         text    html    latex   example
  intervals.gls                     text    html    latex   example
  intervals.lmList                  text    html    latex   example
  intervals.lme                     text    html    latex   example
  isBalanced                        text    html    latex   example
  isInitialized                     text    html    latex   example
  lmList                            text    html    latex   example
  lmList.groupedData                text    html    latex   example
  lme                               text    html    latex   example
  lme.groupedData                   text    html    latex   example
  lme.lmList                        text    html    latex   example
  lmeControl                        text    html    latex   example
  lmeObject                         text    html    latex
  lmeScale                          text    html    latex
  lmeStruct                         text    html    latex   example
  logDet                            text    html    latex   example
  logDet.corStruct                  text    html    latex   example
  logDet.pdMat                      text    html    latex   example
  logDet.reStruct                   text    html    latex   example
  logLik.corStruct                  text    html    latex   example
  logLik.glsStruct                  text    html    latex
  logLik.gnls                       text    html    latex   example
  logLik.gnlsStruct                 text    html    latex
  logLik.lmList                     text    html    latex   example
  logLik.lme                        text    html    latex   example
  logLik.lmeStruct                  text    html    latex
  logLik.reStruct                   text    html    latex
  logLik.varFunc                    text    html    latex   example
  model.matrix.reStruct             text    html    latex   example
  needUpdate                        text    html    latex   example
  needUpdate.modelStruct            text    html    latex   example
  nlme                              text    html    latex   example
  nlme.nlsList                      text    html    latex   example
  nlmeControl                       text    html    latex   example
  nlmeObject                        text    html    latex
  nlmeStruct                        text    html    latex   example
  nlsList                           text    html    latex   example
  nlsList.selfStart                 text    html    latex   example
  pairs.compareFits                 text    html    latex   example
  pairs.lmList                      text    html    latex   example
  pairs.lme                         text    html    latex   example
  pdBlocked                         text    html    latex   example
  pdClasses                         text    html    latex
  pdCompSymm                        text    html    latex   example
  pdConstruct                       text    html    latex   example
  pdConstruct.pdBlocked             text    html    latex   example
  pdDiag                            text    html    latex   example
  pdFactor                          text    html    latex   example
  pdFactor.reStruct                 text    html    latex   example
  pdIdent                           text    html    latex   example
  pdLogChol                         text    html    latex   example
  pdMat                             text    html    latex   example
  pdMatrix                          text    html    latex   example
  pdMatrix.reStruct                 text    html    latex   example
  pdNatural                         text    html    latex   example
  pdSymm                            text    html    latex   example
  phenoModel                        text    html    latex
  plot.ACF                          text    html    latex   example
  plot.Variogram                    text    html    latex   example
  plot.augPred                      text    html    latex   example
  plot.compareFits                  text    html    latex   example
  plot.gls                          text    html    latex   example
  plot.intervals.lmList             text    html    latex   example
  plot.lmList                       text    html    latex   example
  plot.lme                          text    html    latex   example
  plot.nffGroupedData               text    html    latex   example
  plot.nfnGroupedData               text    html    latex   example
  plot.nmGroupedData                text    html    latex   example
  plot.ranef.lmList                 text    html    latex   example
  plot.ranef.lme                    text    html    latex   example
  pooledSD                          text    html    latex   example
  predict.gls                       text    html    latex   example
  predict.gnls                      text    html    latex   example
  predict.lmList                    text    html    latex   example
  predict.lme                       text    html    latex   example
  predict.nlme                      text    html    latex   example
  print.summary.pdMat               text    html    latex   example
  print.varFunc                     text    html    latex   example
  qqnorm.gls                        text    html    latex   example
  qqnorm.lme                        text    html    latex   example
  quinModel                         text    html    latex
  random.effects                    text    html    latex   example
  ranef.lmList                      text    html    latex   example
  ranef.lme                         text    html    latex   example
  reStruct                          text    html    latex   example
  recalc                            text    html    latex   example
  recalc.corStruct                  text    html    latex
  recalc.modelStruct                text    html    latex
  recalc.reStruct                   text    html    latex
  recalc.varFunc                    text    html    latex
  residuals.gls                     text    html    latex   example
  residuals.glsStruct               text    html    latex
  residuals.gnlsStruct              text    html    latex
  residuals.lmList                  text    html    latex   example
  residuals.lme                     text    html    latex   example
  residuals.lmeStruct               text    html    latex
  residuals.nlmeStruct              text    html    latex
  simulate.lme                      text    html    latex   example
  solve.pdMat                       text    html    latex   example
  solve.reStruct                    text    html    latex   example
  splitFormula                      text    html    latex   example
  summary.corStruct                 text    html    latex   example
  summary.gls                       text    html    latex   example
  summary.lmList                    text    html    latex   example
  summary.lme                       text    html    latex   example
  summary.modelStruct               text    html    latex   example
  summary.nlsList                   text    html    latex   example
  summary.pdMat                     text    html    latex   example
  summary.varFunc                   text    html    latex   example
  update.modelStruct                text    html    latex
  update.varFunc                    text    html    latex
  varClasses                        text    html    latex
  varComb                           text    html    latex   example
  varConstPower                     text    html    latex   example
  varExp                            text    html    latex   example
  varFixed                          text    html    latex   example
  varFunc                           text    html    latex   example
  varIdent                          text    html    latex   example
  varPower                          text    html    latex   example
  varWeights                        text    html    latex   example
  varWeights.glsStruct              text    html    latex
  varWeights.lmeStruct              text    html    latex
** building package indices ...
* DONE (nlme)
begin installing recommended package mgcv
* Installing *source* package 'mgcv' ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c gcv.c -o gcv.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c gdi.c -o gdi.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c init.c -o init.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c magic.c -o magic.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c mat.c -o mat.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c matrix.c -o matrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c mgcv.c -o mgcv.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c misc.c -o misc.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c qp.c -o qp.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c tprs.c -o tprs.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o mgcv.so gcv.o gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o qp.o tprs.o -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lRlapack -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lRblas -lgfortran -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'mgcv'
     Formats: text html latex example 
  Predict.matrix                    text    html    latex   example
  Predict.matrix.cr.smooth          text    html    latex   example
  Tweedie                           text    html    latex   example
  anova.gam                         text    html    latex   example
  cSplineDes                        text    html    latex   example
  choose.k                          text    html    latex   example
  exclude.too.far                   text    html    latex   example
  extract.lme.cov                   text    html    latex   example
  fix.family.link                   text    html    latex
  fixDependence                     text    html    latex   example
  formXtViX                         text    html    latex
  formula.gam                       text    html    latex
  full.score                        text    html    latex
  gam                               text    html    latex   example
  gam.check                         text    html    latex   example
  gam.control                       text    html    latex
  gam.convergence                   text    html    latex
  gam.fit                           text    html    latex
  gam.fit3                          text    html    latex
  gam.models                        text    html    latex   example
  gam.outer                         text    html    latex
  gam.selection                     text    html    latex   example
  gam.side                          text    html    latex   example
  gam2objective                     text    html    latex
  gamObject                         text    html    latex
  gamSim                            text    html    latex   example
  gamm                              text    html    latex   example
  get.var                           text    html    latex   example
  influence.gam                     text    html    latex
  initial.sp                        text    html    latex
  interpret.gam                     text    html    latex
  ldTweedie                         text    html    latex   example
  linear.functional.terms           text    html    latex   example
  logLik.gam                        text    html    latex
  magic                             text    html    latex   example
  magic.post.proc                   text    html    latex
  mgcv-package                      text    html    latex   example
  mgcv                              text    html    latex   example
  mgcv.control                      text    html    latex
  model.matrix.gam                  text    html    latex   example
  mono.con                          text    html    latex   example
  mroot                             text    html    latex   example
  negbin                            text    html    latex   example
  new.name                          text    html    latex   example
  notExp                            text    html    latex   example
  notExp2                           text    html    latex   example
  null.space.dimension              text    html    latex   example
  pcls                              text    html    latex   example
  pdIdnot                           text    html    latex   example
  pdTens                            text    html    latex   example
  place.knots                       text    html    latex   example
  plot.gam                          text    html    latex   example
  predict.gam                       text    html    latex   example
  print.gam                         text    html    latex
  residuals.gam                     text    html    latex
  s                                 text    html    latex   example
  smooth.construct                  text    html    latex   example
  smooth.construct.ad.smooth.spec   text    html    latex   example
  smooth.construct.cr.smooth.spec   text    html    latex   example
  smooth.construct.ps.smooth.spec   text    html    latex   example
  smooth.construct.tensor.smooth.sp text    html    latex   example
  smooth.construct.tp.smooth.spec   text    html    latex   example
  smooth.terms                      text    html    latex   example
  smoothCon                         text    html    latex
  sp.vcov                           text    html    latex   example
  step.gam                          text    html    latex   example
  summary.gam                       text    html    latex   example
  te                                text    html    latex   example
  tensor.prod.model.matrix          text    html    latex   example
  uniquecombs                       text    html    latex   example
  vcov.gam                          text    html    latex   example
  vis.gam                           text    html    latex   example
** building package indices ...
* DONE (mgcv)
* Installing *source* package 'Matrix' ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c CHMfactor.c -o CHMfactor.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c Csparse.c -o Csparse.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c TMatrix_as.c -o TMatrix_as.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c Tsparse.c -o Tsparse.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c init.c -o init.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c Mutils.c -o Mutils.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c chm_common.c -o chm_common.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c cs.c -o cs.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c cs_utils.c -o cs_utils.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dense.c -o dense.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dgCMatrix.c -o dgCMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dgTMatrix.c -o dgTMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dgeMatrix.c -o dgeMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dpoMatrix.c -o dpoMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dppMatrix.c -o dppMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dsCMatrix.c -o dsCMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dsyMatrix.c -o dsyMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dspMatrix.c -o dspMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dtCMatrix.c -o dtCMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dtTMatrix.c -o dtTMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dtrMatrix.c -o dtrMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c dtpMatrix.c -o dtpMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c factorizations.c -o factorizations.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c ldense.c -o ldense.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c lgCMatrix.c -o lgCMatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I./UFconfig -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c sparseQR.c -o sparseQR.o
( cd Lib ; make clean )
( cd Source ; make clean )
( cd Source ; make clean )
( cd Lib ; make )
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_aat.c -o cholmod_l_aat.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_add.c -o cholmod_l_add.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_band.c -o cholmod_l_band.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_change_factor.c -o cholmod_l_change_factor.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_common.c -o cholmod_l_common.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_complex.c -o cholmod_l_complex.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_copy.c -o cholmod_l_copy.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_dense.c -o cholmod_l_dense.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_error.c -o cholmod_l_error.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_factor.c -o cholmod_l_factor.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_memory.c -o cholmod_l_memory.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_sparse.c -o cholmod_l_sparse.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_transpose.c -o cholmod_l_transpose.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Core/cholmod_triplet.c -o cholmod_l_triplet.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Check/cholmod_check.c -o cholmod_l_check.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Check/cholmod_read.c -o cholmod_l_read.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Check/cholmod_write.c -o cholmod_l_write.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Cholesky/cholmod_amd.c -o cholmod_l_amd.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Cholesky/cholmod_analyze.c -o cholmod_l_analyze.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Cholesky/cholmod_colamd.c -o cholmod_l_colamd.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Cholesky/cholmod_etree.c -o cholmod_l_etree.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Cholesky/cholmod_factorize.c -o cholmod_l_factorize.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Cholesky/cholmod_postorder.c -o cholmod_l_postorder.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Cholesky/cholmod_rcond.c -o cholmod_l_rcond.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Cholesky/cholmod_resymbol.c -o cholmod_l_resymbol.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Cholesky/cholmod_rowcolcounts.c -o cholmod_l_rowcolcounts.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Cholesky/cholmod_rowfac.c -o cholmod_l_rowfac.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Cholesky/cholmod_solve.c -o cholmod_l_solve.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Cholesky/cholmod_spsolve.c -o cholmod_l_spsolve.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../MatrixOps/cholmod_drop.c -o cholmod_l_drop.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../MatrixOps/cholmod_horzcat.c -o cholmod_l_horzcat.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../MatrixOps/cholmod_norm.c -o cholmod_l_norm.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../MatrixOps/cholmod_scale.c -o cholmod_l_scale.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../MatrixOps/cholmod_sdmult.c -o cholmod_l_sdmult.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../MatrixOps/cholmod_ssmult.c -o cholmod_l_ssmult.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../MatrixOps/cholmod_submatrix.c -o cholmod_l_submatrix.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../MatrixOps/cholmod_vertcat.c -o cholmod_l_vertcat.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../MatrixOps/cholmod_symmetry.c -o cholmod_l_symmetry.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Modify/cholmod_rowadd.c -o cholmod_l_rowadd.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Modify/cholmod_rowdel.c -o cholmod_l_rowdel.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Modify/cholmod_updown.c -o cholmod_l_updown.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Supernodal/cholmod_super_numeric.c -o cholmod_l_super_numeric.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Supernodal/cholmod_super_solve.c -o cholmod_l_super_solve.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../UFconfig -DNPARTITION -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DDLONG -c  ../Supernodal/cholmod_super_symbolic.c -o cholmod_l_super_symbolic.o
ar -rucs ../../CHOLMOD.a cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o  
( cd Source ; make lib )
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c colamd_global.c -o colamd_global.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c colamd.c -o colamd_l.o
ar -rucs ../../COLAMD.a colamd_global.o colamd_l.o # colamd.o
( cd Source ; make lib )
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c amd_global.c -o amd_global.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c amd_1.c -o amd_l_1.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c amd_2.c -o amd_l_2.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c amd_aat.c -o amd_l_aat.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c amd_control.c -o amd_l_control.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c amd_defaults.c -o amd_l_defaults.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c amd_dump.c -o amd_l_dump.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c amd_info.c -o amd_l_info.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c amd_order.c -o amd_l_order.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c amd_post_tree.c -o amd_l_post_tree.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c amd_postorder.c -o amd_l_postorder.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c amd_preprocess.c -o amd_l_preprocess.o
gcc -arch i386 -std=gnu99 -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include -I/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/include/i386 -I../Include -I../../UFconfig -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -I../Include -DDLONG -c amd_valid.c -o amd_l_valid.o
ar -rucs ../../AMD.a amd_global.o amd_l_1.o amd_l_2.o amd_l_aat.o amd_l_control.o amd_l_defaults.o amd_l_dump.o amd_l_info.o amd_l_order.o amd_l_post_tree.o amd_l_postorder.o amd_l_preprocess.o amd_l_valid.o # amd_i_1.o amd_i_2.o amd_i_aat.o amd_i_control.o amd_i_defaults.o amd_i_dump.o amd_i_info.o amd_i_order.o amd_i_post_tree.o amd_i_postorder.o amd_i_preprocess.o amd_i_valid.o
ranlib: file: ../../AMD.a(amd_l_dump.o) has no symbols
g++ -arch i386 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o CHOLMOD.a COLAMD.a AMD.a -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lRlapack -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lRblas -lgfortran -L/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386 -lR -dylib_file libRblas.dylib:/Builds/R-builds/nightly/tiger-i386/R-2.9-branch/lib/i386/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** R
** data
** inst
** preparing package for lazy loading
Creating a generic for "rcond" in package  "Matrix"
    (the supplied definition differs from and overrides the implicit generic in package "base": Formal arguments differ: (x, norm, ...), (x, norm, triangular, ...))
Creating a new generic function for "image" in "Matrix"
Creating a new generic function for "solve" in "Matrix"
Creating a new generic function for "chol2inv" in "Matrix"
Creating a new generic function for "determinant" in "Matrix"
Creating a new generic function for "update" in "Matrix"
Creating a new generic function for "t" in "Matrix"
Creating a new generic function for "diag" in "Matrix"
Creating a new generic function for "as.matrix" in "Matrix"
Creating a new generic function for "as.array" in "Matrix"
Creating a new generic function for "head" in "Matrix"
Creating a new generic function for "tail" in "Matrix"
Creating a new generic function for "drop" in "Matrix"
Creating a new generic function for "as.vector" in "Matrix"
Creating a new generic function for "mean" in "Matrix"
Creating a new generic function for "cov2cor" in "Matrix"
Creating a new generic function for "isSymmetric" in "Matrix"
Creating a new generic function for "unname" in "Matrix"
Creating a new generic function for "kronecker" in "Matrix"
Creating a new generic function for "chol" in "Matrix"
Creating a new generic function for "all.equal" in "Matrix"
Creating a new generic function for "diff" in "Matrix"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csr"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csr"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csc"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csc"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.coo"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.coo"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csr"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csr"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.coo"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csr"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csc"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.coo"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csr"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.coo"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csc"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csr"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csr"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.coo"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csc"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csr"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.coo"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "matrix.csc"
Creating a new generic function for "colSums" in "Matrix"
Creating a new generic function for "colMeans" in "Matrix"
Creating a new generic function for "rowSums" in "Matrix"
Creating a new generic function for "rowMeans" in "Matrix"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "colSums" no definition for class: "igCMatrix"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "rowSums" no definition for class: "igCMatrix"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "colMeans" no definition for class: "igCMatrix"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "rowMeans" no definition for class: "igCMatrix"
Creating a new generic function for "zapsmall" in "Matrix"
Creating a new generic function for "qr" in "Matrix"
Creating a new generic function for "crossprod" in "Matrix"
Creating a new generic function for "tcrossprod" in "Matrix"
Creating a new generic function for "print" in "Matrix"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "graphAM"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "graph"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "graphNEL"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "graphNEL"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "graph"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "graphNEL"
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "coerce" no definition for class: "graphNEL"
Creating a new generic function for "summary" in "Matrix"
Creating a new generic function for "qr.R" in "Matrix"
Creating a new generic function for "qr.qy" in "Matrix"
Creating a new generic function for "qr.qty" in "Matrix"
Creating a new generic function for "qr.coef" in "Matrix"
Creating a new generic function for "qr.resid" in "Matrix"
Creating a new generic function for "qr.fitted" in "Matrix"
** help
*** installing help indices
 >>> Building/Updating help pages for package 'Matrix'
     Formats: text html latex example 
  BunchKaufman-methods              text    html    latex   example
  CAex                              text    html    latex   example
  CHMfactor-class                   text    html    latex   example
  Cholesky-class                    text    html    latex   example
  Cholesky                          text    html    latex   example
  CsparseMatrix-class               text    html    latex   example
  Diagonal                          text    html    latex   example
  Hilbert                           text    html    latex   example
  KNex                              text    html    latex   example
  LU-class                          text    html    latex   example
  Matrix-class                      text    html    latex   example
  Matrix                            text    html    latex   example
  MatrixFactorization-class         text    html    latex   example
  RsparseMatrix-class               text    html    latex   example
  Schur-class                       text    html    latex   example
  Schur                             text    html    latex   example
  SparseM-conv                      text    html    latex
  Subassign-methods                 text    html    latex   example
  TsparseMatrix-class               text    html    latex   example
  USCounties                        text    html    latex   example
  Xtrct-methods                     text    html    latex   example
  all-methods                       text    html    latex   example
  all.equal-methods                 text    html    latex   example
  atomicVector-class                text    html    latex   example
  band                              text    html    latex   example
  bandSparse                        text    html    latex   example
  bdiag                             text    html    latex   example
  cBind                             text    html    latex   example
  chol                              text    html    latex   example
  chol2inv-methods                  text    html    latex   example
  colSums                           text    html    latex   example
  compMatrix-class                  text    html    latex
  contrast                          text    html    latex   example
  dMatrix-class                     text    html    latex   example
  ddenseMatrix-class                text    html    latex   example
  ddiMatrix-class                   text    html    latex   example
  denseMatrix-class                 text    html    latex   example
  dgCMatrix-class                   text    html    latex   example
  dgRMatrix-class                   text    html    latex
  dgTMatrix-class                   text    html    latex   example
  dgeMatrix-class                   text    html    latex
  diagonalMatrix-class              text    html    latex   example
  dpoMatrix-class                   text    html    latex   example
  drop0                             text    html    latex   example
  dsCMatrix-class                   text    html    latex   example
  dsRMatrix-class                   text    html    latex   example
  dsparseMatrix-class               text    html    latex   example
  dsyMatrix-class                   text    html    latex   example
  dtCMatrix-class                   text    html    latex   example
  dtRMatrix-class-def               text    html    latex   example
  dtpMatrix-class                   text    html    latex   example
  dtrMatrix-class                   text    html    latex   example
  expand                            text    html    latex   example
  expm                              text    html    latex   example
  externalFormats                   text    html    latex   example
  facmul                            text    html    latex   example
  forceSymmetric                    text    html    latex   example
  generalMatrix-class               text    html    latex
  image-methods                     text    html    latex   example
  index-class                       text    html    latex   example
  is.na-methods                     text    html    latex   example
  isSymmetric-methods               text    html    latex
  kronecker-methods                 text    html    latex   example
  ldenseMatrix-class                text    html    latex   example
  ldiMatrix-class                   text    html    latex   example
  lgeMatrix-class                   text    html    latex   example
  lsparseMatrix-classes             text    html    latex   example
  lsyMatrix-class                   text    html    latex   example
  ltrMatrix-class                   text    html    latex   example
  lu                                text    html    latex   example
  nMatrix-class                     text    html    latex   example
  ndenseMatrix-class                text    html    latex   example
  nearPD                            text    html    latex   example
  ngeMatrix-class                   text    html    latex   example
  nnzero                            text    html    latex   example
  norm                              text    html    latex   example
  nsparseMatrix-classes             text    html    latex   example
  nsyMatrix-class                   text    html    latex   example
  ntrMatrix-class                   text    html    latex   example
  number-class                      text    html    latex   example
  pMatrix-class                     text    html    latex   example
  printSpMatrix                     text    html    latex   example
  qr-methods                        text    html    latex
  rankMatrix                        text    html    latex   example
  rcond                             text    html    latex   example
  replValue-class                   text    html    latex   example
  spMatrix                          text    html    latex   example
  sparse.model.matrix               text    html    latex   example
  sparseLU-class                    text    html    latex   example
  sparseMatrix-class                text    html    latex   example
  sparseMatrix                      text    html    latex   example
  sparseQR-class                    text    html    latex   example
  sparseVector-class                text    html    latex   example
  symmetricMatrix-class             text    html    latex   example
  symmpart                          text    html    latex   example
  tcrossprod                        text    html    latex   example
  triangularMatrix-class            text    html    latex   example
  unpack                            text    html    latex   example
  unused-classes                    text    html    latex   example
  xtabs                             text    html    latex   example
** building package indices ...
Loading required package: Matrix

Attaching package: 'Matrix'


	The following object(s) are masked from package:stats :

	 contr.SAS,
	 contr.helmert,
	 contr.poly,
	 contr.sum,
	 contr.treatment,
	 xtabs 


	The following object(s) are masked from package:base :

	 rcond 

* DONE (Matrix)

[[system return code 0x0]]